Factsheet for Solyc06g053560.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g008950.2.1
Solyc02g076680.2.1
Solyc03g005240.1.1
Solyc06g053930.2.1
Solyc06g074500.1.1
Solyc07g065490.2.1
Solyc10g006000.2.1
Solyc10g077010.1.1
Solyc10g081170.1.1
Solyc11g066930.1.1
Solyc11g072240.1.1
Solyc12g099990.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23340.1	Solyc02g076680.2.1	AT1G29240.1	21798944
AT3G23340.1	Solyc06g074500.1.1	AT2G27770.1	21798944
AT3G23340.1	Solyc11g066930.1.1	AT2G27770.1	21798944
AT3G23340.1	Solyc02g076680.2.1	AT4G18630.1	21798944
AT4G14340.1	Solyc01g008950.2.1	AT2G41090.1	17360592
AT4G14340.1	Solyc10g077010.1.1	AT2G41090.1	17360592
AT4G14340.1	Solyc10g081170.1.1	AT2G41090.1	17360592
AT4G14340.1	Solyc11g072240.1.1	AT2G41090.1	17360592
AT4G14340.1	Solyc12g099990.1.1	AT2G41090.1	17360592
AT4G14340.1	Solyc01g008950.2.1	AT2G41100.1	17360592
AT4G14340.1	Solyc10g077010.1.1	AT2G41100.1	17360592
AT4G14340.1	Solyc10g081170.1.1	AT2G41100.1	17360592
AT4G14340.1	Solyc11g072240.1.1	AT2G41100.1	17360592
AT4G14340.1	Solyc12g099990.1.1	AT2G41100.1	17360592
AT4G14340.1	Solyc03g005240.1.1	AT4G14640.1	17360592
AT4G14340.1	Solyc06g053930.2.1	AT4G14640.1	17360592
AT4G14340.1	Solyc07g065490.2.1	AT4G26630.1	25387881
AT4G14340.1	Solyc10g006000.2.1	AT4G26630.1	25387881
AT4G14340.1	Solyc01g008950.2.1	AT5G21274.1	17360592
AT4G14340.1	Solyc10g077010.1.1	AT5G21274.1	17360592
AT4G14340.1	Solyc10g081170.1.1	AT5G21274.1	17360592
AT4G14340.1	Solyc11g072240.1.1	AT5G21274.1	17360592
AT4G14340.1	Solyc12g099990.1.1	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g090250.2.1	Tomato	nucleus	86.2	82.11
VIT_05s0049g01240.t01	Wine grape	cytosol	85.29	81.25
Solyc09g090230.1.1	Tomato	cytosol, nucleus	21.27	81.03
KRH34398	Soybean	nucleus	80.77	78.98
KRG92405	Soybean	cytosol	81.0	78.51
Solyc06g008320.2.1	Tomato	cytosol, nucleus	80.54	77.9
Solyc09g066440.2.1	Tomato	cytosol	80.54	77.39
Solyc06g083830.2.1	Tomato	cytosol	79.86	76.91
CDY18127	Canola	cytosol	74.89	76.44
Bra023732.1-P	Field mustard	cytosol	74.89	76.44
CDY66573	Canola	cytosol	74.66	76.21
AT3G23340.1	Thale cress	cytosol	74.89	74.89
CDY12062	Canola	cytosol	74.89	74.05
CDX90256	Canola	cytosol	75.57	73.89
Bra010762.1-P	Field mustard	cytosol	75.57	73.89
CDY12761	Canola	cytosol	74.43	73.77
AT4G14340.1	Thale cress	cytosol	74.66	72.21
CDY49413	Canola	cytosol	73.98	72.19
Solyc12g007280.1.1	Tomato	cytosol	55.66	65.6
Solyc08g066870.2.1	Tomato	cytosol, nucleus	53.17	61.52
Solyc09g090240.1.1	Tomato	cytosol	26.02	58.97
Solyc03g121820.2.1	Tomato	cytosol, nucleus	61.09	57.45
Solyc06g062790.2.1	Tomato	cytosol, nucleus	60.18	56.96
Solyc05g016410.2.1	Tomato	cytosol, nucleus	59.95	56.5
Solyc07g040720.2.1	Tomato	nucleus	59.5	55.72
Solyc08g066410.1.1	Tomato	cytosol	21.04	26.96
Solyc12g100310.1.1	Tomato	nucleus	32.58	23.92
Solyc01g006120.2.1	Tomato	nucleus	33.48	21.7
Solyc12g095830.1.1	Tomato	nucleus	33.48	20.99
Solyc11g070170.1.1	Tomato	cytosol, mitochondrion, nucleus, plastid	32.58	20.81
Solyc10g080700.1.1	Tomato	nucleus	32.13	20.03
Solyc08g066400.1.1	Tomato	cytosol	10.86	14.41

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.4.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0006810	GO:GO:0006897
GO:GO:0008150	GO:GO:0008152	GO:GO:0008360	GO:GO:0009653	GO:GO:0009987	GO:GO:0016043
GO:GO:0016301	GO:GO:0016740	GO:GO:0018105	GO:GO:0019538	InterPro:IPR000719	UniProt:K4C643
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR11909
PANTHER:PTHR11909:SF178	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:Solyc06g053560.2	EnsemblPlants:Solyc06g053560.2.1	UniParc:UPI000276574D	SEG:seg	:	:

Description

No Description!

Coordinates

chr6:-:36367455..36379454

Molecular Weight (calculated)

50332.1 Da

IEP (calculated)

10.210

GRAVY (calculated)

-0.644

Length

442 amino acids

Sequence
(BLAST)

001: MDSVIGGKYK LGRKIGSGSF GELYLGVNIQ SGEEVAVKLE PVKTKHPQLH YESKLYMLLQ GGTGIPHLKW FGVEGEYSAM VIDLLGPSLE DLFNYCNRKF
101: TLKTVLMLAD QLINRVEYMH SRGFLHRDIK PDNFLMGLGR KANQVYAIDY GLAKKYRDLH THKHIPYREN KNLTGTARYA SVNTHLGVEQ SRRDDLESLG
201: YVLMYFLRGS LPWQGLRAGT KKQKYDKISE KKMLTPIEVL CKSYQSEFTS YFHYCRSLRF DDKPDYSYLK RLFRDLFIRE GYQFDYVFDW TTLKYPQISS
301: SSRGRQAIGR LPLNPGPSVE RAEKPPVGQD IKDKFSGAAE AFARKNVSGT GFTGDRLRHR SSEHLSSSRD VADSERGRMS RTDSTSRRAV MSSSRPSSSS
401: QKNQPGFEAK SSSVTRATVA KESRDHALRS FELLTIGTGR RK

Best Arabidopsis Sequence Match ( AT4G14340.1 )
(BLAST)

001: MDRNQKMDHV IGGKFKLGRK LGSGSFGELY LGINIQTGEE VAVKLEPVKT RHPQLQYESK IYMFLQGGTG VPHLKWFGVE GEYSCMVIDL LGPSLEDLFN
101: YCKRIFSLKS VLMLADQLIC RVEYMHSRGF LHRDIKPDNF LMGLGRRANQ VYIIDYGLAK KYKDLQTQKH IPYRENKNLT GTARYASVNT HLGIEQSRRD
201: DLESLGYVLM YFLRGSLPWQ GLKAGTKKQK YDKISEKKML TSVETLCKSY PSEFTSYFHY CRSLRFEDKP DYSYLRRLFR DLFIREGYQL DYVFDWTISK
301: YPQIGSSSRP RPTPRPALDP PGPPAERAEK PTVGQDLRGR FTGAIEAFTR RNVSSQGALG DRSRHRSSDD IPSSAKEVHE SRNGSTSKRG VISSTRPGSS
401: AEPSENHSSR LFSSGSRHAT TQRVPQSYES AAAARPGHED AIRNFELLTI GSGKKRK

Arabidopsis Description

CKL11Casein kinase 1-like protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q39050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.