Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- golgi 1
- plasma membrane 2
- endoplasmic reticulum 1
- vacuole 1
- cytosol 4
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY10056 | Canola | cytosol | 72.41 | 48.0 |
| Solyc06g053560.2.1 | Tomato | cytosol | 81.03 | 21.27 |
| Solyc06g083830.2.1 | Tomato | cytosol | 81.9 | 20.7 |
| Solyc06g008320.2.1 | Tomato | cytosol, nucleus | 80.17 | 20.35 |
| Solyc09g090250.2.1 | Tomato | nucleus | 81.03 | 20.26 |
| Solyc09g066440.2.1 | Tomato | cytosol | 79.31 | 20.0 |
| Os02t0810400-01 | Rice | cytosol | 79.31 | 19.91 |
| KXG31326 | Sorghum | cytosol | 79.31 | 19.74 |
| Zm00001d018440_P002 | Maize | cytosol | 79.31 | 19.66 |
| Zm00001d051951_P002 | Maize | cytosol | 78.45 | 19.44 |
| TraesCS6D01G362500.1 | Wheat | cytosol | 78.45 | 19.24 |
| TraesCS6A01G378000.1 | Wheat | cytosol | 78.45 | 19.24 |
| TraesCS6B01G415700.2 | Wheat | cytosol | 78.45 | 19.04 |
| AT5G43320.1 | Thale cress | cytosol | 76.72 | 18.54 |
| CDY14873 | Canola | cytosol | 75.86 | 18.53 |
| Bra035974.1-P | Field mustard | cytosol | 75.86 | 18.53 |
| CDY56353 | Canola | cytosol | 75.86 | 18.41 |
| AT1G04440.1 | Thale cress | cytosol | 73.28 | 18.16 |
| Solyc12g007280.1.1 | Tomato | cytosol | 58.62 | 18.13 |
| CDY69732 | Canola | cytosol | 72.41 | 18.06 |
| Bra032511.1-P | Field mustard | cytosol | 72.41 | 17.99 |
| CDY43608 | Canola | cytosol | 74.14 | 17.84 |
| Bra027483.1-P | Field mustard | cytosol | 74.14 | 17.84 |
| CDY32954 | Canola | cytosol | 74.14 | 17.84 |
| CDY53188 | Canola | cytosol | 71.55 | 17.77 |
| Bra015317.1-P | Field mustard | cytosol | 69.83 | 17.69 |
| Solyc07g040720.2.1 | Tomato | nucleus | 71.55 | 17.58 |
| Solyc08g066870.2.1 | Tomato | cytosol, nucleus | 57.76 | 17.54 |
| Solyc05g016410.2.1 | Tomato | cytosol, nucleus | 70.69 | 17.48 |
| CDX89823 | Canola | cytosol | 69.83 | 17.46 |
| Solyc03g121820.2.1 | Tomato | cytosol, nucleus | 69.83 | 17.23 |
| CDY18233 | Canola | cytosol | 69.83 | 17.16 |
| Solyc06g062790.2.1 | Tomato | cytosol, nucleus | 68.97 | 17.13 |
| Solyc08g066410.1.1 | Tomato | cytosol | 35.34 | 11.88 |
| Solyc12g100310.1.1 | Tomato | nucleus | 33.62 | 6.48 |
| Solyc11g070170.1.1 | Tomato | cytosol, mitochondrion, nucleus, plastid | 37.93 | 6.36 |
| Solyc01g006120.2.1 | Tomato | nucleus | 36.21 | 6.16 |
| Solyc12g095830.1.1 | Tomato | nucleus | 37.07 | 6.1 |
| Solyc10g080700.1.1 | Tomato | nucleus | 35.34 | 5.78 |
| Solyc09g090240.1.1 | Tomato | cytosol | 0.0 | 0.0 |
| Os02t0810500-01 | Rice | cytosol, plasma membrane | 0.0 | 0.0 |
| Solyc08g066400.1.1 | Tomato | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Solyc09g090230.1.1 | EnsemblPlantsGene:Solyc09g090230.1 | Gene3D:3.30.200.20 | InterPro:Kinase-like_dom_sf | PANTHER:PTHR11909 | PANTHER:PTHR11909:SF114 |
| SUPFAM:SSF56112 | UniParc:UPI000276CB6B | UniProt:K4CW49 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr9:+:69774937..69776168
Molecular Weight (calculated)
13143.9 Da
IEP (calculated)
6.094
GRAVY (calculated)
-0.180
Length
116 amino acids
Sequence
(BLAST)
(BLAST)
001: MDHVVGGTYK LGLKIGKGYL ADYLGVNVQT EEEVAVKLES TKTEHPHLHY ESKLYRLLQG GTGIPNVRWF GVEGEYNAMV IDLLGPSLED LFNYCNRRFT
101: LKTVLMLADQ LINRVE
101: LKTVLMLADQ LINRVE
001: MDLVIGGKFK LGRKIGSGSF GELYLGINVQ TGEEVAVKLE SVKTKHPQLH YESKLYMLLQ GGTGVPNLKW YGVEGDYNVM VIDLLGPSLE DLFNYCNRKL
101: SLKTVLMLAD QLINRVEFMH TRGFLHRDIK PDNFLMGLGR KANQVYIIDF GLGKKYRDLQ THRHIPYREN KNLTGTARYA SVNTHLGVEQ SRRDDLEALG
201: YVLMYFLKGS LPWQGLKAGT KKQKYDRISE KKVATPIEVL CKNQPSEFVS YFRYCRSLRF DDKPDYSYLK RLFRDLFIRE GYQFDYVFDW TVLKYPQIGS
301: SSGSSSRTRN HTTANPGLTA GASLEKQERI AGKETRENRF SGAVEAFSRR HPATSTTRDR SASRNSVDGP LSKHPPGDSE RPRSSSRYGS SSRRAIPSSS
401: RPSSAGGPSD SRSSSRLVTS TGGVGTVSNR ASTSQRIQAG NESRTSSFSR AARNTREDPL RRSLELLTLR K
101: SLKTVLMLAD QLINRVEFMH TRGFLHRDIK PDNFLMGLGR KANQVYIIDF GLGKKYRDLQ THRHIPYREN KNLTGTARYA SVNTHLGVEQ SRRDDLEALG
201: YVLMYFLKGS LPWQGLKAGT KKQKYDRISE KKVATPIEVL CKNQPSEFVS YFRYCRSLRF DDKPDYSYLK RLFRDLFIRE GYQFDYVFDW TVLKYPQIGS
301: SSGSSSRTRN HTTANPGLTA GASLEKQERI AGKETRENRF SGAVEAFSRR HPATSTTRDR SASRNSVDGP LSKHPPGDSE RPRSSSRYGS SSRRAIPSSS
401: RPSSAGGPSD SRSSSRLVTS TGGVGTVSNR ASTSQRIQAG NESRTSSFSR AARNTREDPL RRSLELLTLR K
Arabidopsis Description
CKL9Casein kinase 1-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZWB3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.