Factsheet for Solyc09g066440.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400026692	Potato	cytosol	99.13	99.13
Solyc06g008320.2.1	Tomato	cytosol, nucleus	91.52	92.12
Solyc06g083830.2.1	Tomato	cytosol	90.22	90.41
VIT_07s0005g03710.t01	Wine grape	cytosol	86.3	86.68
Solyc09g090250.2.1	Tomato	nucleus	81.74	81.03
Solyc06g053560.2.1	Tomato	cytosol	77.39	80.54
Solyc09g090230.1.1	Tomato	cytosol, nucleus	20.0	79.31
Os04t0514800-01	Rice	cytosol	75.0	75.99
GSMUA_Achr3P04680_001	Banana	cytosol	76.96	75.32
GSMUA_Achr10P...	Banana	cytosol	76.09	75.11
GSMUA_AchrUn_...	Banana	cytosol	75.43	74.78
Os02t0622100-01	Rice	nucleus	75.22	74.73
KXG26713	Sorghum	cytosol	73.91	74.73
GSMUA_Achr5P14540_001	Banana	cytosol	75.87	73.78
TraesCS6B01G256000.1	Wheat	cytosol	74.13	73.18
TraesCS6A01G225600.1	Wheat	cytosol	73.91	72.96
TraesCS6D01G210400.1	Wheat	cytosol	73.91	72.96
HORVU6Hr1G058230.6	Barley	cytosol	73.91	72.96
Zm00001d025853_P001	Maize	cytosol	71.96	72.27
GSMUA_Achr9P13290_001	Banana	cytosol	77.39	71.2
KXG38336	Sorghum	cytosol	74.13	71.19
EES05449	Sorghum	cytosol	71.74	70.97
TraesCS5B01G428600.3	Wheat	cytosol	73.04	70.74
TraesCS5D01G434700.3	Wheat	cytosol	72.83	69.94
TraesCS5A01G426700.2	Wheat	cytosol	72.39	69.52
HORVU5Hr1G103860.19	Barley	cytosol	63.04	69.21
Zm00001d003049_P003	Maize	cytosol	72.61	69.15
Os10t0476300-02	Rice	plasma membrane	70.0	67.79
Zm00001d017261_P006	Maize	cytosol	71.52	67.14
Solyc12g007280.1.1	Tomato	cytosol	52.83	64.8
Zm00001d051135_P005	Maize	cytosol	69.78	64.07
Zm00001d014038_P003	Maize	cytosol	68.04	62.85
Solyc03g121820.2.1	Tomato	cytosol, nucleus	63.26	61.91
Solyc09g090240.1.1	Tomato	cytosol	26.09	61.54
Solyc05g016410.2.1	Tomato	cytosol, nucleus	61.74	60.55
Zm00001d032715_P002	Maize	cytosol	71.74	60.22
Solyc07g040720.2.1	Tomato	nucleus	61.52	59.96
Solyc06g062790.2.1	Tomato	cytosol, nucleus	60.87	59.96
Solyc08g066870.2.1	Tomato	cytosol, nucleus	49.78	59.95
Solyc08g066410.1.1	Tomato	cytosol	20.87	27.83
Solyc12g100310.1.1	Tomato	nucleus	31.96	24.42
Solyc01g006120.2.1	Tomato	nucleus	32.39	21.85
Solyc11g070170.1.1	Tomato	cytosol, mitochondrion, nucleus, plastid	31.96	21.24
Solyc12g095830.1.1	Tomato	nucleus	32.39	21.13
Solyc10g080700.1.1	Tomato	nucleus	31.3	20.31
Solyc08g066400.1.1	Tomato	cytosol	10.43	14.41

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.4.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0006810	GO:GO:0006897
GO:GO:0008150	GO:GO:0008152	GO:GO:0008360	GO:GO:0009653	GO:GO:0009987	GO:GO:0016043
GO:GO:0016301	GO:GO:0016740	GO:GO:0018105	GO:GO:0019538	InterPro:IPR000719	UniProt:K4CUR9
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR11909
PANTHER:PTHR11909:SF176	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:Solyc09g066440.2	EnsemblPlants:Solyc09g066440.2.1	UniParc:UPI000276AD62	SEG:seg	:	:

Description

No Description!

Coordinates

chr9:-:64852985..64862252

Molecular Weight (calculated)

51858.7 Da

IEP (calculated)

10.271

GRAVY (calculated)

-0.615

Length

460 amino acids

Sequence
(BLAST)

001: MDHVVGGKFK LGRKIGSGSF GELYLGVNLQ NGEEVAIKLE SVKTKHPQLH YESKIYMLLS GGTGIPNLKW FGVEGEYNVM VIDLLGPSLE DLFNYCNRKL
101: SLKTVLMLAD QLINRVEYMH SRGFLHRDIK PDNFLMGLGR KANQVYAIDF GLAKKYRDLQ THKHIPYREN KNLTGTARYA SVNTHLGVEQ SRRDDLESLG
201: YVLMYFLRGS LPWQGLKAGT KKQKYDKISE KKMLTPIEVL CKSYPSEFIS YFHYCRSLRF EDKPDYSYLK RLFRDLFIRE GYQFDYVFDW TILKYPQIGA
301: SSRGRNIGGS APLNAVPSAE RPGRTSVGQD IRDRFSGAVG AFSRRNASSS GRHGEHSRHK TSDDIPSSKD VQADSDRGRT SRNCSSSRRA AISSSRPSSS
401: GEPTESRSSS RLVSSSGRLS ATQRIHSGAE PKPSLFSRTS VTKGSRDDPL RSFELLSIRK

Best Arabidopsis Sequence Match ( AT4G28540.1 )
(BLAST)

001: MDLKMDNVIG GKFKLGRKIG GGSFGELFLA VSLQTGEEAA VKLEPAKTKH PQLHYESKIY MLLQGGSGIP SLKWFGVQGD YNAMVIDLLG PSLEDLFNYC
101: NRRLTLKAVL MLADQLISRV EYMHSRGFLH RDIKPDNFLM GLGRKANQVY IIDFGLAKKY RDLQTHRHIP YRENKNLTGT ARYASVNTHL GVEQSRRDDL
201: ESLGYVLMYF LRGSLPWQGL KAGTKKQKYD RISEKKVSTP IEVLCKSYPP EFVSYFQYCR SLRFEDKPDY SYLKRLFRDL FIREGYQFDY VFDWTALKHP
301: QSSARSHSST HERHRTGKPG MGAGPSAEKP ERISVGNIRD KFSGAVEAFA RRNVRGPSPH QNHTRHRTLD EIPSMKPAVN MVSEKGRNTS RYGSASRRAV
401: ASGSRPSSSG EQRESRDSSR VASSGGGVRP SVFQRTQAAA AVSGYESKTA SAFNRDRVAA SRTARDEALR SFELLSIRK

Arabidopsis Description

CKL6Casein kinase 1-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPJ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.