CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014038_P003	Maize	cytosol	89.77	86.35
TraesCS5A01G426700.2	Wheat	cytosol	84.55	84.55
TraesCS5D01G434700.3	Wheat	cytosol	84.55	84.55
HORVU5Hr1G103860.19	Barley	cytosol	73.9	84.49
TraesCS5B01G428600.3	Wheat	cytosol	83.51	84.21
Zm00001d032715_P002	Maize	cytosol	95.82	83.76
Os10t0476300-02	Rice	plasma membrane	80.38	81.05
PGSC0003DMT400065568	Potato	cytosol	72.86	76.37
Solyc06g008320.2.1	Tomato	cytosol, nucleus	71.61	75.05
Solyc06g083830.2.1	Tomato	cytosol	71.61	74.73
PGSC0003DMT400026692	Potato	cytosol	71.61	74.57
PGSC0003DMT400051696	Potato	cytosol	71.4	74.51
Solyc09g066440.2.1	Tomato	cytosol	71.19	74.13
VIT_07s0005g03710.t01	Wine grape	cytosol	69.73	72.93
GSMUA_Achr3P04680_001	Banana	cytosol	70.98	72.34
GSMUA_Achr10P...	Banana	cytosol	70.15	72.1
GSMUA_Achr5P14540_001	Banana	cytosol	70.56	71.46
GSMUA_AchrUn_...	Banana	cytosol	69.1	71.34
KXG26713	Sorghum	cytosol	67.43	70.99
KXG31326	Sorghum	cytosol	67.64	69.53
EES05449	Sorghum	cytosol	66.6	68.6
GSMUA_Achr9P13290_001	Banana	cytosol	70.56	67.6
EES01354	Sorghum	cytosol	57.41	58.51
EES20064	Sorghum	cytosol	55.53	56.12
KXG30048	Sorghum	cytosol	47.81	54.65
EES00938	Sorghum	cytosol	53.03	54.04
KXG31490	Sorghum	cytosol	47.81	53.13
EES00121	Sorghum	cytosol	31.32	24.63
EES19200	Sorghum	cytosol	31.11	24.55
OQU79738	Sorghum	nucleus	30.9	23.99
OQU79450	Sorghum	nucleus	29.85	23.91
KXG34480	Sorghum	cytosol	29.85	20.08
EER93310	Sorghum	mitochondrion, plastid	28.6	19.38
OQU87630	Sorghum	plastid	29.85	18.77

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.4.1	EntrezGene:8070490	UniProt:C5WYG7	ProteinID:EER94084.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464
GO:GO:0006468	GO:GO:0006810	GO:GO:0006897	GO:GO:0008150	GO:GO:0008152	GO:GO:0008360
GO:GO:0009653	GO:GO:0009987	GO:GO:0016043	GO:GO:0016301	GO:GO:0016740	GO:GO:0018105
GO:GO:0019538	InterPro:IPR000719	EnsemblPlants:KXG38336	ProteinID:KXG38336	ProteinID:KXG38336.1	InterPro:Kinase-like_dom_sf
PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR11909	PANTHER:PTHR11909:SF176	InterPro:Prot_kinase_dom
SMART:SM00220	EnsemblPlantsGene:SORBI_3001G220500	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A827E7	RefSeq:XP_002467086.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:20750531..20755796

Molecular Weight (calculated)

53671.7 Da

IEP (calculated)

10.224

GRAVY (calculated)

-0.679

Length

479 amino acids

Sequence
(BLAST)

001: MEHVIGGKYK LGRKIGSGSF GELYLGVNIQ NGEEVGIKLE PVKTKHPQLH YESKVYMLLQ GGNGIPHLKW YGVEGEYNVM VIDLLGPSLE DLFNCCNRKF
101: SMKTVLMLAD QLINRVEYMH SKGFIHRDIK PDNFLMGLGR KANQVYIIDY GLAKKYKDLQ THKHIPYREN KNLTGTARYA SVNTHLGIEQ SRRDDLESVG
201: YLLLYFLRGS LPWQGLKAGT KKQKYDKISE KKMLTSAEVL CKSYPSEFIS YFHYCRSLRF EDRPDYSFLK KLFRDVFIRE GYQFDYVFDW TALKYPQMGS
301: NNKLVQQPSA RMAGVGPSVE RTDKASVGQE IRERFTGAVE AFARRNPGSG RHGDHSRHKS LADSFGTSNE AVAADSEKTR ILSRGGSSSK MPAANSSGRP
401: TSSGDCSDQN RRWVSGSSGG SGRPSTAQRL HHSGGAENSR SSPRSPVARN AAGRGGSGSR DNTTFRSLER LSITTSRRK

Best Arabidopsis Sequence Match ( AT3G23340.1 )
(BLAST)

001: MDHVIGGKFK LGRKIGSGSF GELYIGINVQ TGEEVALKLE PVKTKHPQLH YESKVYMLLQ GGTGVPHIKW FGVEGNYNCM AIDLLGPSLE DLFNYCTRSF
101: SLKTVLMLAD QLINRVEYMH SRGFLHRDIK PDNFLMGLGR KANQVYIIDY GLAKKYRDLQ THKHIPYREN KNLTGTARYA SVNTHLGIEQ SRRDDLESLG
201: YVLMYFIRGS LPWQGLKAGT KKQKYEKISE KKMLTPVEVL CKSYPSEFTS YFHYCRSLRF EDKPDYSYLK RLFRDLFIRE GYQFDYVFDW TILKYPQSGS
301: ISKPRPNPKP ALDPPGPSAE RNEKPIVGQD LRERFSGAVE AFARRNVPSH GIRPKHIFSD DASKEVQVSE KTRNEIATKM AVMSSSQPGS SGELSENRSS
401: KLFSSSAQKI QPVQETKLSA RLGRDDGLRS FDMLTIGSGK RK

Arabidopsis Description

CKL10Casein kinase 1-like protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LW62]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.