Factsheet for GSMUA_Achr5P14540_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400065568	Potato	cytosol	75.05	77.68
GSMUA_Achr3P32290_001	Banana	cytosol	24.1	77.55
Solyc06g008320.2.1	Tomato	cytosol, nucleus	74.21	76.81
GSMUA_AchrUn_...	Banana	cytosol	74.84	76.29
PGSC0003DMT400051696	Potato	cytosol	74.0	76.25
Solyc06g083830.2.1	Tomato	cytosol	73.78	76.03
GSMUA_Achr3P04680_001	Banana	cytosol	75.48	75.96
PGSC0003DMT400026692	Potato	cytosol	73.78	75.87
Solyc09g066440.2.1	Tomato	cytosol	73.78	75.87
VIT_07s0005g03710.t01	Wine grape	cytosol	73.15	75.55
KXG26713	Sorghum	cytosol	72.3	75.16
Os02t0622100-01	Rice	nucleus	73.57	75.16
Os04t0514800-01	Rice	cytosol	71.88	74.89
GSMUA_Achr10P...	Banana	cytosol	72.94	74.03
TraesCS6A01G225600.1	Wheat	cytosol	71.67	72.75
TraesCS6B01G256000.1	Wheat	cytosol	71.67	72.75
HORVU6Hr1G058230.6	Barley	cytosol	71.67	72.75
TraesCS6D01G210400.1	Wheat	cytosol	71.46	72.53
Zm00001d025853_P001	Maize	cytosol	69.77	72.05
TraesCS5B01G428600.3	Wheat	cytosol	71.25	70.95
GSMUA_Achr9P13290_001	Banana	cytosol	74.63	70.6
TraesCS5D01G434700.3	Wheat	cytosol	71.46	70.56
KXG38336	Sorghum	cytosol	71.46	70.56
TraesCS5A01G426700.2	Wheat	cytosol	71.04	70.15
EES05449	Sorghum	cytosol	68.92	70.11
HORVU5Hr1G103860.19	Barley	cytosol	61.95	69.93
Zm00001d003049_P003	Maize	cytosol	71.25	69.77
Os10t0476300-02	Rice	plasma membrane	67.23	66.95
Zm00001d017261_P006	Maize	cytosol	68.92	66.53
Zm00001d051135_P005	Maize	cytosol	67.65	63.87
Zm00001d014038_P003	Maize	cytosol	65.96	62.65
GSMUA_Achr4P09160_001	Banana	cytosol	60.47	60.85
GSMUA_Achr8P19730_001	Banana	cytosol	38.05	60.4
GSMUA_Achr4P08690_001	Banana	cytosol	60.04	60.04
Zm00001d032715_P002	Maize	cytosol	69.56	60.04
GSMUA_Achr7P24210_001	Banana	cytosol	59.41	58.54
GSMUA_Achr6P35790_001	Banana	cytosol	58.35	58.23
GSMUA_Achr5P09640_001	Banana	cytosol	57.72	57.96
GSMUA_AchrUn_...	Banana	cytosol	57.51	57.51
GSMUA_Achr7P13580_001	Banana	cytosol	56.87	57.23
GSMUA_Achr7P14470_001	Banana	cytosol	51.8	56.58
GSMUA_Achr8P24940_001	Banana	cytosol	57.72	55.38
GSMUA_Achr2P19240_001	Banana	cytosol	49.89	54.38
GSMUA_Achr3P32300_001	Banana	endoplasmic reticulum, plasma membrane	35.1	42.89
GSMUA_Achr9P00060_001	Banana	cytosol	15.43	32.16
GSMUA_AchrUn_...	Banana	cytosol	24.31	30.75
GSMUA_Achr9P25780_001	Banana	cytosol	31.29	25.61
GSMUA_Achr2P15650_001	Banana	cytosol	32.56	25.45
GSMUA_Achr9P06110_001	Banana	cytosol	32.35	25.21
GSMUA_Achr11P...	Banana	cytosol	31.5	24.83
GSMUA_Achr6P26340_001	Banana	cytosol	31.5	24.59
GSMUA_Achr4P01010_001	Banana	plastid	32.56	22.51
GSMUA_Achr8P16690_001	Banana	endoplasmic reticulum, plasma membrane	31.71	22.32
GSMUA_Achr8P20360_001	Banana	cytosol	31.71	21.01
GSMUA_Achr6P11480_001	Banana	plastid	31.08	20.94
GSMUA_Achr9P00070_001	Banana	extracellular	5.5	11.76
GSMUA_AchrUn_...	Banana	cytosol	4.44	11.41

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.4.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr5G14540_001	EnsemblPlants:GSMUA_Achr5P14540_001
EnsemblPlants:GSMUA_Achr5T14540_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0SYI3	PFAM:PF00069	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR11909	PANTHER:PTHR11909:SF176	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002962592	SEG:seg	:	:	:

Description

Casein kinase I isoform delta-like [Source:GMGC_GENE;Acc:GSMUA_Achr5G14540_001]

Coordinates

chr5:+:10497298..10503319

Molecular Weight (calculated)

53507.6 Da

IEP (calculated)

10.091

GRAVY (calculated)

-0.647

Length

473 amino acids

Sequence
(BLAST)

001: MEQVVGGKFK LGRKIGSGSF GELYLGVNIQ TGEEVGVKLE PVKTKHPQLQ YESKLYMLLQ GGTGIPQLKW FGVEGDYNAM VIDLLGPSLE DLFNYCSQKF
101: SLKTVLMLAD QLISRVEYMH SKGFLHRDIK PDNFLMGLGR KANQVYIIDY GLAKKYRDLQ THKHIPYREN KNLTGTARYA SVNTHIGVEQ SRRDDLESLG
201: YVLMYFLRGS LPWQGLKAGT KKQKYDRISE KKMLTPVEVL CKSYPAEFIS YFHYCRSLGF EDKPDYSYLK RLFRELFIRE GYQFDYVFDW TMLKHPQSSA
301: NPRTHQPSGR PTGGAGLSLE RTEKTSVGQE IRDRFSGAVE AFARRNALGS GYHGEHSRNR ASEDLSFSAK ETVLDSDKSR ASSSRNGSIS RRAVPSNSRL
401: NSSTDFSEQH LSRTSQVSNS SGSSRTPIMQ RLHQSGPEPR SSPLARPAAG RSSHDARTLR SMEFLSISAE RRK

Best Arabidopsis Sequence Match ( AT4G28540.1 )
(BLAST)

001: MDLKMDNVIG GKFKLGRKIG GGSFGELFLA VSLQTGEEAA VKLEPAKTKH PQLHYESKIY MLLQGGSGIP SLKWFGVQGD YNAMVIDLLG PSLEDLFNYC
101: NRRLTLKAVL MLADQLISRV EYMHSRGFLH RDIKPDNFLM GLGRKANQVY IIDFGLAKKY RDLQTHRHIP YRENKNLTGT ARYASVNTHL GVEQSRRDDL
201: ESLGYVLMYF LRGSLPWQGL KAGTKKQKYD RISEKKVSTP IEVLCKSYPP EFVSYFQYCR SLRFEDKPDY SYLKRLFRDL FIREGYQFDY VFDWTALKHP
301: QSSARSHSST HERHRTGKPG MGAGPSAEKP ERISVGNIRD KFSGAVEAFA RRNVRGPSPH QNHTRHRTLD EIPSMKPAVN MVSEKGRNTS RYGSASRRAV
401: ASGSRPSSSG EQRESRDSSR VASSGGGVRP SVFQRTQAAA AVSGYESKTA SAFNRDRVAA SRTARDEALR SFELLSIRK

Arabidopsis Description

CKL6Casein kinase 1-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPJ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.