Factsheet for PGSC0003DMT400065568

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g008320.2.1	Tomato	cytosol, nucleus	97.81	97.81
PGSC0003DMT400026692	Potato	cytosol	92.78	92.17
PGSC0003DMT400051696	Potato	cytosol	91.68	91.29
VIT_07s0005g03710.t01	Wine grape	cytosol	87.09	86.9
GSMUA_Achr3P04680_001	Banana	cytosol	77.9	75.74
GSMUA_Achr10P...	Banana	cytosol	76.81	75.32
Os04t0514800-01	Rice	cytosol	74.62	75.11
GSMUA_Achr5P14540_001	Banana	cytosol	77.68	75.05
GSMUA_AchrUn_...	Banana	cytosol	76.15	75.0
Os02t0622100-01	Rice	nucleus	75.71	74.73
KXG26713	Sorghum	cytosol	74.4	74.73
TraesCS6A01G225600.1	Wheat	cytosol	75.05	73.61
TraesCS6B01G256000.1	Wheat	cytosol	75.05	73.61
HORVU6Hr1G058230.6	Barley	cytosol	74.84	73.39
TraesCS6D01G210400.1	Wheat	cytosol	74.84	73.39
KXG38336	Sorghum	cytosol	76.37	72.86
TraesCS5B01G428600.3	Wheat	cytosol	75.49	72.63
Zm00001d025853_P001	Maize	cytosol	72.43	72.27
TraesCS5D01G434700.3	Wheat	cytosol	75.27	71.82
GSMUA_Achr9P13290_001	Banana	cytosol	78.56	71.8
TraesCS5A01G426700.2	Wheat	cytosol	74.84	71.4
EES05449	Sorghum	cytosol	72.43	71.18
HORVU5Hr1G103860.19	Barley	cytosol	65.21	71.12
Zm00001d003049_P003	Maize	cytosol	73.3	69.36
Os10t0476300-02	Rice	plasma membrane	71.99	69.26
Zm00001d017261_P006	Maize	cytosol	72.21	67.35
Zm00001d014038_P003	Maize	cytosol	70.24	64.46
Zm00001d051135_P005	Maize	cytosol	70.46	64.27
PGSC0003DMT400006625	Potato	cytosol	63.68	61.78
Zm00001d032715_P002	Maize	cytosol	73.74	61.5
PGSC0003DMT400082747	Potato	cytosol	62.14	60.17
PGSC0003DMT400001003	Potato	cytosol	54.7	59.1
PGSC0003DMT400012385	Potato	cytosol	60.18	58.89
PGSC0003DMT400024850	Potato	cytosol	51.64	55.66
PGSC0003DMT400081865	Potato	cytosol	29.32	21.82
PGSC0003DMT400047803	Potato	cytosol, mitochondrion, nucleus, plastid	32.6	21.63
PGSC0003DMT400075580	Potato	cytosol	31.95	20.68
PGSC0003DMT400060832	Potato	cytosol	31.51	20.31
PGSC0003DMT400010926	Potato	cytosol	8.32	16.59

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102578304	MapMan:18.4.4.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1CE95	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG402025508	PGSC:PGSC0003DMG402025508
EnsemblPlants:PGSC0003DMT400065568	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR11909	PANTHER:PTHR11909:SF114
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002967AD5
RefSeq:XP_006365891.1	SEG:seg	:	:	:	:

Description

Casein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG402025508]

Coordinates

chr6:+:1635550..1642910

Molecular Weight (calculated)

51750.7 Da

IEP (calculated)

10.231

GRAVY (calculated)

-0.647

Length

457 amino acids

Sequence
(BLAST)

001: MDHVVGGKFK LGRKIGSGSF GELYLGVNIQ NGEEVAIKLE SVKTKHPQLH YESKIYMLLQ GGTGIPNLKW FGVEGEYNVM VIDLLGPSLE DLFNYCNRKF
101: TLKTVLMLAD QLINRVEYMH SRGFLHRDIK PDNFLMGLGR KANQVYAIDF GLAKKYRDLQ THKHIPYREN KNLTGTARYA SVNTHLGVEQ SRRDDLESLG
201: YVLMYFLRGS LPWQGLKAGT KKQKYDKISE KKMLTPIEVL CKSYPSEFIS YFHYCRSLRF EDKPDYSYLK RLFRDLFIRE GYQFDYVFDW TILKYPQIGA
301: SSRGRLPGGS AGLNAGPSAE RPGRTSVGQD IRDRFSGAVE AFSRRNASGT GKHGEYSRHK TSEDMTSSKD VQADSERGRT SRNGSSSKRA AISSSRPSSS
401: GDPTITDSRS SRLVSSNGRV STTQRIHLGM EPKPSPFSRK GTRDDPLRSF EFLSIRK

Best Arabidopsis Sequence Match ( AT4G14340.1 )
(BLAST)

001: MDRNQKMDHV IGGKFKLGRK LGSGSFGELY LGINIQTGEE VAVKLEPVKT RHPQLQYESK IYMFLQGGTG VPHLKWFGVE GEYSCMVIDL LGPSLEDLFN
101: YCKRIFSLKS VLMLADQLIC RVEYMHSRGF LHRDIKPDNF LMGLGRRANQ VYIIDYGLAK KYKDLQTQKH IPYRENKNLT GTARYASVNT HLGIEQSRRD
201: DLESLGYVLM YFLRGSLPWQ GLKAGTKKQK YDKISEKKML TSVETLCKSY PSEFTSYFHY CRSLRFEDKP DYSYLRRLFR DLFIREGYQL DYVFDWTISK
301: YPQIGSSSRP RPTPRPALDP PGPPAERAEK PTVGQDLRGR FTGAIEAFTR RNVSSQGALG DRSRHRSSDD IPSSAKEVHE SRNGSTSKRG VISSTRPGSS
401: AEPSENHSSR LFSSGSRHAT TQRVPQSYES AAAARPGHED AIRNFELLTI GSGKKRK

Arabidopsis Description

CKL11Casein kinase 1-like protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q39050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.