Factsheet for PGSC0003DMT400081865

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g006120.2.1	Tomato	nucleus	97.72	87.98
GSMUA_Achr11P...	Banana	cytosol	71.34	73.0
CDY23629	Canola	cytosol	59.93	70.1
CDY55141	Canola	cytosol	71.17	69.15
CDX97505	Canola	mitochondrion	72.31	67.99
CDX75726	Canola	mitochondrion	71.99	67.79
KRH01814	Soybean	nucleus	74.1	67.71
KRH46874	Soybean	nucleus	73.78	67.41
CDX82524	Canola	mitochondrion	71.66	67.28
TraesCS5B01G000400.2	Wheat	cytosol	64.66	66.5
TraesCS5A01G000600.2	Wheat	cytosol	64.66	66.5
TraesCS5D01G000900.1	Wheat	cytosol	64.5	66.33
Zm00001d041186_P002	Maize	nucleus	64.01	65.61
GSMUA_Achr8P16690_001	Banana	endoplasmic reticulum, plasma membrane	71.66	65.48
Bra001518.1-P	Field mustard	cytosol	72.8	65.45
Bra021498.1-P	Field mustard	cytosol	72.8	65.45
GSMUA_Achr6P11480_001	Banana	plastid	74.59	65.24
CDY51730	Canola	cytosol	72.64	65.2
OQU79738	Sorghum	nucleus	65.31	64.99
Bra027409.1-P	Field mustard	cytosol, plastid	72.8	64.88
VIT_06s0004g01090.t01	Wine grape	nucleus	74.92	64.43
KRG93028	Soybean	cytosol	70.2	64.42
KRH36274	Soybean	nucleus	70.36	64.29
HORVU5Hr1G000060.5	Barley	cytosol	62.22	64.2
AT3G13670.1	Thale cress	cytosol	73.29	64.01
PGSC0003DMT400075580	Potato	cytosol	68.24	59.35
PGSC0003DMT400047803	Potato	cytosol, mitochondrion, nucleus, plastid	65.8	58.64
PGSC0003DMT400010926	Potato	cytosol	21.17	56.77
PGSC0003DMT400060832	Potato	cytosol	65.31	56.56
PGSC0003DMT400001003	Potato	cytosol	20.36	29.55
PGSC0003DMT400026692	Potato	cytosol	21.99	29.35
PGSC0003DMT400065568	Potato	cytosol	21.82	29.32
PGSC0003DMT400051696	Potato	cytosol	21.5	28.76
PGSC0003DMT400012385	Potato	cytosol	21.5	28.27
PGSC0003DMT400082747	Potato	cytosol	21.5	27.97
PGSC0003DMT400006625	Potato	cytosol	21.01	27.39
PGSC0003DMT400024850	Potato	cytosol	18.89	27.36

Protein Annotations

Gene3D:1.10.510.10	MapMan:12.3.6.2	MapMan:18.4.4.2	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1D567	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400032142	PGSC:PGSC0003DMG400032142
EnsemblPlants:PGSC0003DMT400081865	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR11909	PANTHER:PTHR11909:SF207
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002965C66
SEG:seg	:	:	:	:	:

Description

Casein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400032142]

Coordinates

chr1:+:1615105..1622855

Molecular Weight (calculated)

68357.4 Da

IEP (calculated)

8.494

GRAVY (calculated)

-0.487

Length

614 amino acids

Sequence
(BLAST)

001: MPELRSGVCR RRAPLPVVET KPETKKRVGG GGVGGRSYIK TRAAKAKAAE AEAEAKLVEV EEEEEEAKVE VKENENERVE GEEVEEEHKM GDESGGLSAN
101: NKVTAQEDES TSLFPDQVQV GGSPVYKVER KLGKGGFGQV FLGRRLTGGN ERASGPLALE VALKFEHRNS KGCSYGPPYE WQVYNTLGGS HGVPRVHYKG
201: RAGDYYVMVM DMLGPSLWDV WNSSGQSMSA EMVACIAVES LSILEKLHAK GYVHGDVKPE NFLLGQPSTP QEKKLFLVDL GLATKWKDTS KGQHVGYDQR
301: PDTFRGTVRY ASAHAHLGRT ASRRDDLESL AYTLIFLHRG RLPWQGYQGD NKSFLVCKKK MATSPEMLCC FCPAPFREFL DTVINMKFDE EPKYSKLISL
401: FGSLLGADPA IRPINTDGAQ KAIQVGQKRG RLSLNEEEEQ PQKKIRIGVP ATQWISIYNA RKPMKQRYHY NVADTRLAQH VEKGSVDGLS ISCVASCSSL
501: WAIIMDAGTN FTSQVYELSP FFLHKEWIME QWEKNYYISS LAGGINGASL VVMSKGTQFT QQSYKVSESF PFKWISKKWK EGFHVTSMAT ANTRWAVVMS
601: RNSGFSDQVV CPPL

Best Arabidopsis Sequence Match ( AT3G13670.1 )
(BLAST)

001: MPELRRGVRR GRVTDAVAPN QLPQTPTEKK PKKSTVKAPK PVAGGVTGVA ERPRTRLAAR KLKEEDKEIP QEIPVVVPSK DSDIDKNKGK EVVVEEEKKD
101: MAIGNDSGGS NKAAAQEEEG NTAPFPERVQ VGGSPLYKVE RKLGKGGFGQ VFVGRRISGG NDRSAGASIL EVALKFEHRS SKGCNYGPPH EWQVYNTLGG
201: SHGVPRVHFK GRQGDYYVMV MDMLGPSLWD LWNTSGQAMS SEMVACIAVE SLSILEKMHA KGYVHGDVKP ENFLLGQPST SQEKKLFLVD LGLATKWREG
301: GSGQHVEYDQ RPDMFRGTVR YASAHAHLGR TASRRDDLES LAYTLIFLHR GRLPWQGYQG DNKSFLVCKK KMATSPDMLC CFCPPPFKQF LEIVVNMKFD
401: EEPNYGKLVS LFQDLLGENP AIRPINTEGA QKIIFQVGQK RGRLSIGEEE EDAPRKKVRL GVPATQWISI YNARQPMKQR YHYNVADIRL AQHIERGIAD
501: GLLISCVSSC SNLWALIMDA GTGFTHQVYE LSPVFLHKEW IMEQWEKNYY ISSIAGASNG SSLVVMSKGT QYTQQSYKVS DSFPFKWINK KWREGFHVTS
601: MATAGNRWGV VMSRNSGYSE QVVELDFLYP SEGIHRRWDG GFRITSTAAT TDQAALILSI PRRRLVDETQ ETLRTSQFPS THVKEKWGKN LYLASLSYGR
701: TVS

Arabidopsis Description

Casein kinase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LID3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.