Factsheet for PGSC0003DMT400001003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 5
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g007280.1.1	Tomato	cytosol	87.94	99.2
VIT_11s0016g03460.t01	Wine grape	cytosol	81.32	79.45
KRH39332	Soybean	cytosol	75.89	75.35
GSMUA_Achr7P14470_001	Banana	cytosol	77.07	75.29
KRH60238	Soybean	cytosol	76.12	74.88
KRH41527	Soybean	nucleus	76.12	74.88
KRH76321	Soybean	cytosol	76.36	74.77
GSMUA_Achr2P19240_001	Banana	cytosol	75.18	73.27
AT4G28860.1	Thale cress	cytosol	70.45	71.98
AT4G28880.1	Thale cress	cytosol	70.21	71.57
CDY06860	Canola	cytosol	70.45	71.46
CDX92899	Canola	cytosol	70.69	71.02
CDY50929	Canola	cytosol	70.45	70.78
Bra011067.1-P	Field mustard	cytosol	69.74	70.74
CDY35229	Canola	cytosol	69.27	70.26
TraesCS6B01G218400.1	Wheat	cytosol	66.67	69.8
GSMUA_Achr8P19730_001	Banana	cytosol	48.94	69.46
TraesCS6D01G174800.2	Wheat	cytosol	66.9	69.02
TraesCS6A01G196400.2	Wheat	cytosol	66.9	69.02
Os02t0280400-02	Rice	cytosol	67.61	68.75
PGSC0003DMT400024850	Potato	cytosol	68.09	67.92
Bra024179.1-P	Field mustard	cytosol, plastid	67.38	66.59
KXG30048	Sorghum	cytosol	65.96	66.59
TraesCS3D01G162900.1	Wheat	cytosol	63.59	66.58
TraesCS3B01G181900.3	Wheat	cytosol	63.59	66.58
TraesCS3A01G155400.4	Wheat	cytosol	63.59	66.58
Zm00001d053316_P013	Maize	cytosol	65.96	65.49
Os01t0231500-01	Rice	cytosol	66.19	65.12
Zm00001d039296_P005	Maize	cytosol	63.12	64.96
KXG31490	Sorghum	cytosol	64.3	63.11
HORVU0Hr1G016190.11	Barley	cytosol	58.39	63.01
HORVU3Hr1G031560.1	Barley	cytosol, plastid	64.07	56.93
PGSC0003DMT400065568	Potato	cytosol	59.1	54.7
PGSC0003DMT400026692	Potato	cytosol	59.1	54.35
PGSC0003DMT400051696	Potato	cytosol	58.87	54.25
PGSC0003DMT400082747	Potato	cytosol	59.81	53.6
PGSC0003DMT400012385	Potato	cytosol	58.63	53.1
PGSC0003DMT400006625	Potato	cytosol	59.1	53.08
PGSC0003DMT400081865	Potato	cytosol	29.55	20.36
PGSC0003DMT400047803	Potato	cytosol, mitochondrion, nucleus, plastid	30.26	18.58
PGSC0003DMT400075580	Potato	cytosol	30.97	18.56
PGSC0003DMT400060832	Potato	cytosol	30.02	17.91
PGSC0003DMT400010926	Potato	cytosol	3.78	6.99

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102598967	MapMan:18.4.4.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0ZHQ3	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400000372	PGSC:PGSC0003DMG400000372
EnsemblPlants:PGSC0003DMT400001003	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR11909	PANTHER:PTHR11909:SF97
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002954305
RefSeq:XP_006353475.1	SEG:seg	:	:	:	:

Description

Casein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400000372]

Coordinates

chr12:-:4320974..4327862

Molecular Weight (calculated)

47952.5 Da

IEP (calculated)

9.948

GRAVY (calculated)

-0.493

Length

423 amino acids

Sequence
(BLAST)

001: MDRIVGGKFK LGRKIGSGSF GEIFLATHID SFEIVAVKIE NNKTKHPQLL YEAKLYNILQ GGSGVPHIKW SGVDGDDNVL VMDLLGPSLE DLFVYCDRKL
101: SLKTVLMLAD QMITRIEYVH SKGFLHRDIK PDNFLMGLGR KANQVYIIDF GLAKRYRDAT TNRHIPYREN KNLTGTARYA SCNTHLGIEQ SRRDDLESLG
201: YVLLYFLRGS LPWQGLKAAT KKQKYDKICQ KKLSTPIEVL CKSHPVEFAS YFHYCHSLTF DQRPDYGFLK RLFRELFTRQ GYEFDYIFDW TILKYQQAQT
301: SKSQHRQVGG ESSRAIPMDV EKRQVSTGNN GPYVAEVTDR IRPNNPSSPG IRMQFKSPTN RNLTSANLER NVLSSAHMPS SSLAPVLPRA NATKPVLPTE
401: TTHDGDNGGS SWMSSLRRIS SAK

Best Arabidopsis Sequence Match ( AT4G28880.3 )
(BLAST)

001: MERIIGGKYK LGRKIGGGSF GEIFLATHVD TFEIVAVKIE NSKTKHPQLL YEAKLYRILE GGSGIPRIKW FGVDGTENAL VMDLLGPSLE DLFVYCGRKF
101: SPKTVLMLAD QMLTRIEFVH SKGYLHRDIK PDNFLMGLGR KANQVYLIDF GLAKRYRDAN TNRHIPYREN KNLTGTARYA SCNTHLGIEQ SRRDDLESLG
201: YVLLYFLRGS LPWQGLKAVD KKQKYDKICE KKISTPIEVL CKNHPVEFAS YFHYCHTLTF DQRPDYGFLK RLFRDLFSRE GYEFDYIFDW TIIKYQQAQK
301: SRNQSQAVPG SSNPRAMPVD TSNHRGGPNI SYEAEASERV RSANAIGPSP QINNNTAAGR TPGFDHPVHK NMNMPSTSLS PAGTSKRNVG PETSNSGYGS
401: GNRTGWTSSF MSPEK

Arabidopsis Description

CKL3Ckl3 [Source:UniProtKB/TrEMBL;Acc:A0A178UXY3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.