CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39332	Soybean	cytosol	95.37	96.71
KRH41527	Soybean	nucleus	86.81	87.21
KRH60238	Soybean	cytosol	86.81	87.21
VIT_11s0016g03460.t01	Wine grape	cytosol	81.71	81.52
Solyc12g007280.1.1	Tomato	cytosol	69.68	80.27
PGSC0003DMT400001003	Potato	cytosol	74.77	76.36
AT4G28880.1	Thale cress	cytosol	73.15	76.14
AT4G28860.1	Thale cress	cytosol	72.69	75.85
KRH12421	Soybean	cytosol	29.17	75.45
CDY50929	Canola	cytosol	73.38	75.3
CDX92899	Canola	cytosol	73.15	75.06
GSMUA_Achr7P14470_001	Banana	cytosol	74.77	74.6
CDY35229	Canola	cytosol	70.6	73.14
Bra011067.1-P	Field mustard	cytosol	70.37	72.9
CDY06860	Canola	cytosol	70.37	72.9
GSMUA_Achr2P19240_001	Banana	cytosol	72.92	72.58
KRH12426	Soybean	cytosol	40.05	72.08
Bra024179.1-P	Field mustard	cytosol, plastid	69.44	70.09
TraesCS6B01G218400.1	Wheat	cytosol	65.05	69.55
GSMUA_Achr8P19730_001	Banana	cytosol	47.92	69.46
TraesCS3D01G162900.1	Wheat	cytosol	64.35	68.81
TraesCS3B01G181900.3	Wheat	cytosol	64.35	68.81
Os02t0280400-02	Rice	cytosol	66.2	68.75
TraesCS3A01G155400.4	Wheat	cytosol	64.12	68.56
TraesCS6A01G196400.2	Wheat	cytosol	65.05	68.54
TraesCS6D01G174800.2	Wheat	cytosol	65.05	68.54
KRH62054	Soybean	cytosol	66.9	67.68
KRH52721	Soybean	cytosol	66.2	66.82
KXG30048	Sorghum	cytosol	64.35	66.35
Os01t0231500-01	Rice	cytosol	65.28	65.58
HORVU0Hr1G016190.11	Barley	cytosol	59.03	65.05
Zm00001d053316_P013	Maize	cytosol	63.66	64.55
Zm00001d039296_P005	Maize	cytosol	61.34	64.48
KRH04915	Soybean	cytosol	62.27	63.29
KXG31490	Sorghum	cytosol	62.5	62.65
HORVU3Hr1G031560.1	Barley	cytosol, plastid	64.58	58.61
KRH37421	Soybean	nucleus	60.42	57.24
KRH02686	Soybean	nucleus	59.95	57.05
KRH19210	Soybean	nucleus	59.95	57.05
KRH10045	Soybean	nucleus	61.11	56.05
KRH34398	Soybean	nucleus	58.56	55.97
KRH23272	Soybean	cytosol	61.11	55.93
KRH32213	Soybean	cytosol	57.64	55.09
KRH44105	Soybean	cytosol	60.65	55.04
KRG92405	Soybean	cytosol	57.87	54.82
KRH19588	Soybean	cytosol, nucleus	57.41	54.75
KRG95693	Soybean	cytosol	58.8	54.39
KRH67417	Soybean	nucleus	58.1	53.63
KRH47076	Soybean	cytosol	43.52	49.87
KRH66363	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	28.24	47.84
KRH12422	Soybean	cytosol, nucleus	30.56	45.83
KRH52778	Soybean	nucleus	30.09	21.45
KRG93028	Soybean	cytosol	30.09	19.43
KRH36274	Soybean	nucleus	30.09	19.35
KRH62090	Soybean	cytosol	30.09	19.29
KRH46874	Soybean	nucleus	29.4	18.9
KRH01814	Soybean	nucleus	29.4	18.9
KRH62093	Soybean	nucleus	30.56	18.59
KRH06716	Soybean	nucleus	30.09	18.34
KRH44285	Soybean	nucleus	29.4	17.86
KRH47219	Soybean	nucleus	29.86	17.84

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100798768	MapMan:18.4.4.1	EMBL:ACUP02000605	EnsemblPlantsGene:GLYMA_01G146100	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464
GO:GO:0006468	GO:GO:0006810	GO:GO:0006897	GO:GO:0008150	GO:GO:0008152	GO:GO:0008360
GO:GO:0009653	GO:GO:0009987	GO:GO:0016043	GO:GO:0016301	GO:GO:0016740	GO:GO:0018105
GO:GO:0019538	UniProt:I1J801	InterPro:IPR000719	EnsemblPlants:KRH76321	ProteinID:KRH76321	ProteinID:KRH76321.1
ProteinID:KRH76322.1	ProteinID:KRH76323.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR11909	PANTHER:PTHR11909:SF97	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00023BEB98	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:48126704..48134251

Molecular Weight (calculated)

48525.1 Da

IEP (calculated)

9.808

GRAVY (calculated)

-0.447

Length

432 amino acids

Sequence
(BLAST)

001: MERIICAKYK LGRKIGSGSF GEIYLATNID TFEIVAVKIE NGKTKHPQLL YEAKLYNILQ GGSGIPNIKW CGVDGEDNVL VMDLLGPSLE DLFVYCGRKF
101: SLKSVLMLAD QMMTRIEYVH SKGFLHRDIK PDNFLMGLGR KANQVYIIDF GLAKRYRDSS TNRHIPYREN KNLTGTARYA SCNTHLGIEQ SRRDDLESLG
201: YVLLYFLRGS LPWQNLKAAT KKQKYDKICE KKVSTPIEVL CKSHPVEFAS YFHYCHSLTF DQRPDYGFLK RLFRDLFARE GYEFDYVFDW TILKYQQAQK
301: NRVQSRISTV PGTSSSPAMP MDVDNHRGIN AYSGDVTAER IKSGNVTGSG VKIQFKSPVG KNLGSEKPLD KNIFGEANIP STSYSVAGTS RRNTLKPALS
401: TEAPNPGHGQ GSNKIGPSSS WISSVQRISS AK

Best Arabidopsis Sequence Match ( AT4G28860.1 )
(BLAST)

001: MERIIGGKYK LGRKIGGGSF GEIFLATHID TFEIVAVKIE NSKTKHPQLL YEAKLYRTLE GGSGIPRIRW FGVDGTENAL VMDLLGPSLE DLFVYCGRKF
101: SPKTVLMLAD QMLTRIEYVH SKGYLHRDIK PDNFLMGLGR KANQVYLIDF GLAKRYRDAN TNRHIPYREN KNLTGTARYA SCNTHLGIEQ GRRDDLESLG
201: YVLLYFLRGS LPWQGLKAVD KKQKYDKICE KKISTPIEVL CKSHPVEFAS YFHYCHTLTF DQRPDYGFLK RLFRDLFSRE GYEFDYIYDW TIIKYQQSQK
301: TRSQSQAVPG SSNARAIPMD TSNHRGGTKI SHEAQVSDRV RPANASGPSP QINTAVGRSL GFDQVHKNMN MPSSTSLSPA GTSKRNVRPE TSNSGFGSGN
401: KTGGWTSPFM SPGK

Arabidopsis Description

CKL4Casein kinase 1-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPI7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.