CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52721	Soybean	cytosol	95.78	95.56
KRH12421	Soybean	cytosol	27.4	70.06
KRH04915	Soybean	cytosol	69.09	69.41
KRH12426	Soybean	cytosol	38.88	69.17
KRH41527	Soybean	nucleus	68.38	67.91
KRH60238	Soybean	cytosol	67.45	66.98
KRH76321	Soybean	cytosol	67.68	66.9
KRH39332	Soybean	cytosol	66.28	66.43
KRH34398	Soybean	nucleus	56.44	53.32
KRH02686	Soybean	nucleus	55.74	52.42
KRH19210	Soybean	nucleus	55.74	52.42
KRH32213	Soybean	cytosol	55.27	52.21
KRG92405	Soybean	cytosol	55.74	52.19
KRH37421	Soybean	nucleus	55.74	52.19
KRH10045	Soybean	nucleus	56.91	51.59
KRH19588	Soybean	cytosol, nucleus	54.57	51.43
KRG95693	Soybean	cytosol	56.21	51.39
KRH67417	Soybean	nucleus	55.74	50.85
KRH23272	Soybean	cytosol	55.97	50.64
KRH44105	Soybean	cytosol	56.21	50.42
KRH47076	Soybean	cytosol	41.45	46.95
KRH66363	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	26.93	45.1
KRH12422	Soybean	cytosol, nucleus	26.7	39.58
KRH52778	Soybean	nucleus	29.27	20.63
KRH62090	Soybean	cytosol	29.04	18.4
KRG93028	Soybean	cytosol	28.34	18.09
KRH46874	Soybean	nucleus	28.34	18.01
KRH36274	Soybean	nucleus	28.34	18.01
KRH01814	Soybean	nucleus	28.34	18.01
KRH62093	Soybean	nucleus	29.74	17.89
KRH06716	Soybean	nucleus	29.04	17.49
KRH44285	Soybean	nucleus	28.57	17.16
KRH47219	Soybean	nucleus	29.04	17.15

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100810377	MapMan:18.4.4.1	EMBL:ACUP02002216	EnsemblPlantsGene:GLYMA_04G082900	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464
GO:GO:0006468	GO:GO:0006810	GO:GO:0006897	GO:GO:0008150	GO:GO:0008152	GO:GO:0008360
GO:GO:0009653	GO:GO:0009987	GO:GO:0016043	GO:GO:0016301	GO:GO:0016740	GO:GO:0018105
GO:GO:0019538	UniProt:I1JUU5	InterPro:IPR000719	ProteinID:KRH62053.1	EnsemblPlants:KRH62054	ProteinID:KRH62054
ProteinID:KRH62054.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR11909	PANTHER:PTHR11909:SF97	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI00023394E6	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:6995190..7001443

Molecular Weight (calculated)

48147.7 Da

IEP (calculated)

9.980

GRAVY (calculated)

-0.551

Length

427 amino acids

Sequence
(BLAST)

001: MERVIGGKFK IGRKIGSGSF GEIYIASNMD TSEIVAIKME SKKTKHPQLL YEAKLYSILQ GESGIPSMKW CGTDGDNNVL VIDLLGRSLE DFFVYCGRKF
101: SLKTVLMLAD QMLTRIECMH SKGFLHRDIK PDNFLMGLGR KSNQVYIIDF GLAKRYRDPN TNKHIPYREN KSLTGTARYA SCNTHMGIEQ SRRDDLESLG
201: YVLMYFLRGS LPWQGLKAAT KKEKYDNICE KKLSTPIGML CKSYPAEFAS YFHYCQSLTF DQHPDYGYLK RLFRDLFKRE GYDSDYIFDW TILKYQQAQQ
301: TKKQNQSSPS TAVPSSLEPV VVEKHKGVND SAHVTVTKML ANLERPSAPR VQPKPSNVQN LDAKNHIEKH GVNNSPSTSS ATPKSSTVNA SKPERPAGTS
401: NLGRVFGSNA RVSSSWIPSL RRISSAK

Best Arabidopsis Sequence Match ( AT4G28860.1 )
(BLAST)

001: MERIIGGKYK LGRKIGGGSF GEIFLATHID TFEIVAVKIE NSKTKHPQLL YEAKLYRTLE GGSGIPRIRW FGVDGTENAL VMDLLGPSLE DLFVYCGRKF
101: SPKTVLMLAD QMLTRIEYVH SKGYLHRDIK PDNFLMGLGR KANQVYLIDF GLAKRYRDAN TNRHIPYREN KNLTGTARYA SCNTHLGIEQ GRRDDLESLG
201: YVLLYFLRGS LPWQGLKAVD KKQKYDKICE KKISTPIEVL CKSHPVEFAS YFHYCHTLTF DQRPDYGFLK RLFRDLFSRE GYEFDYIYDW TIIKYQQSQK
301: TRSQSQAVPG SSNARAIPMD TSNHRGGTKI SHEAQVSDRV RPANASGPSP QINTAVGRSL GFDQVHKNMN MPSSTSLSPA GTSKRNVRPE TSNSGFGSGN
401: KTGGWTSPFM SPGK

Arabidopsis Description

CKL4Casein kinase 1-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPI7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.