CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62054	Soybean	cytosol	95.56	95.78
KRH12421	Soybean	cytosol	27.34	70.06
KRH12426	Soybean	cytosol	38.55	68.75
KRH04915	Soybean	cytosol	67.99	68.47
KRH41527	Soybean	nucleus	67.29	66.98
KRH60238	Soybean	cytosol	66.59	66.28
KRH76321	Soybean	cytosol	66.82	66.2
KRH39332	Soybean	cytosol	65.65	65.96
KRH34398	Soybean	nucleus	55.61	52.65
KRH02686	Soybean	nucleus	55.14	51.98
KRH19210	Soybean	nucleus	55.14	51.98
KRH37421	Soybean	nucleus	55.14	51.75
KRH32213	Soybean	cytosol	54.44	51.55
KRG92405	Soybean	cytosol	54.91	51.54
KRG95693	Soybean	cytosol	55.84	51.18
KRH10045	Soybean	nucleus	56.31	51.17
KRH19588	Soybean	cytosol, nucleus	53.97	50.99
KRH67417	Soybean	nucleus	55.37	50.64
KRH23272	Soybean	cytosol	55.37	50.21
KRH44105	Soybean	cytosol	55.84	50.21
KRH47076	Soybean	cytosol	41.12	46.68
KRH66363	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	26.17	43.92
KRH12422	Soybean	cytosol, nucleus	26.4	39.24
KRH52778	Soybean	nucleus	29.21	20.63
KRH62090	Soybean	cytosol	28.97	18.4
KRH62093	Soybean	nucleus	29.67	17.89
KRG93028	Soybean	cytosol	27.8	17.79
KRH46874	Soybean	nucleus	27.8	17.71
KRH36274	Soybean	nucleus	27.8	17.71
KRH01814	Soybean	nucleus	27.8	17.71
KRH06716	Soybean	nucleus	28.5	17.21
KRH44285	Soybean	nucleus	28.5	17.16
KRH47219	Soybean	nucleus	28.97	17.15

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100792736	MapMan:18.4.4.1	EMBL:ACUP02003429	EnsemblPlantsGene:GLYMA_06G084300	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464
GO:GO:0006468	GO:GO:0006810	GO:GO:0006897	GO:GO:0008150	GO:GO:0008152	GO:GO:0008360
GO:GO:0009653	GO:GO:0009987	GO:GO:0016043	GO:GO:0016301	GO:GO:0016740	GO:GO:0018105
GO:GO:0019538	UniProt:I1K9C5	InterPro:IPR000719	ProteinID:KRH52720.1	EnsemblPlants:KRH52721	ProteinID:KRH52721
ProteinID:KRH52721.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR11909	PANTHER:PTHR11909:SF97	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000233A74C	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:6487976..6494012

Molecular Weight (calculated)

48489.0 Da

IEP (calculated)

9.888

GRAVY (calculated)

-0.554

Length

428 amino acids

Sequence
(BLAST)

001: MERVIGGKFK IGRKIGSGSF GEIYIASNID TSEIVAIKME SKKTKHPQLL YEAKLYSILQ GESGVPSMKW CGTDGDNNVL VIDLLGRSLE DFFVYCGRKF
101: SLKTVLMLAD QMLTRIEYMH SKGFLHRDIK PDNFLMGLGR KSNQVYIIDF GLAKRYRDPN TNKHIPYREN KSLTGTARYA SCNTHMGIEQ SCRDDLESLG
201: YVLMYFLRGS LPWQGLKAAT KKEKYDNICE KKLSTTIEML CKSYPAEFAT YFHYCQSLTF DQHPDYGYLK RLFRDLFKRE GYDSDFIFDW TILKYQQVQQ
301: TNKQNQSSPS TAVPSSLEPV VMEKHKGVND SAHVTVTKML ANLERPSARA RVQPKPSNVR NLDAKNHTEK HGVNNSPSTS SAIPKSSTEN VSKPERPTGT
401: SNLGRVFGSN ARVSSSWIPS LRRISSAK

Best Arabidopsis Sequence Match ( AT4G28860.1 )
(BLAST)

001: MERIIGGKYK LGRKIGGGSF GEIFLATHID TFEIVAVKIE NSKTKHPQLL YEAKLYRTLE GGSGIPRIRW FGVDGTENAL VMDLLGPSLE DLFVYCGRKF
101: SPKTVLMLAD QMLTRIEYVH SKGYLHRDIK PDNFLMGLGR KANQVYLIDF GLAKRYRDAN TNRHIPYREN KNLTGTARYA SCNTHLGIEQ GRRDDLESLG
201: YVLLYFLRGS LPWQGLKAVD KKQKYDKICE KKISTPIEVL CKSHPVEFAS YFHYCHTLTF DQRPDYGFLK RLFRDLFSRE GYEFDYIYDW TIIKYQQSQK
301: TRSQSQAVPG SSNARAIPMD TSNHRGGTKI SHEAQVSDRV RPANASGPSP QINTAVGRSL GFDQVHKNMN MPSSTSLSPA GTSKRNVRPE TSNSGFGSGN
401: KTGGWTSPFM SPGK

Arabidopsis Description

CKL4Casein kinase 1-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPI7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.