CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
cytosol 2
nucleus 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g080700.1.1	Tomato	nucleus	88.29	88.29
PGSC0003DMT400060832	Potato	cytosol	87.87	87.87
VIT_08s0007g07420.t01	Wine grape	cytosol	87.73	87.73
AT3G03940.1	Thale cress	cytosol, plastid	83.36	84.31
CDY42890	Canola	cytosol	82.37	83.43
CDY38493	Canola	cytosol	81.1	83.33
CDX70801	Canola	cytosol	80.39	83.33
CDY21155	Canola	cytosol	82.65	83.24
AT5G18190.2	Thale cress	cytosol	81.1	83.21
CDY51243	Canola	cytosol	80.11	83.04
Bra036426.1-P	Field mustard	cytosol	82.37	82.95
CDY29971	Canola	cytosol	82.23	82.93
Bra002140.1-P	Field mustard	cytosol	80.82	82.92
CDY25451	Canola	cytosol	80.68	82.9
Bra006445.1-P	Field mustard	cytosol	79.27	82.77
Zm00001d005806_P001	Maize	cytosol	12.84	82.73
Bra023667.1-P	Field mustard	cytosol	79.27	82.16
CDY02641	Canola	cytosol	79.27	81.92
Zm00001d042649_P001	Maize	mitochondrion	39.07	79.6
Zm00001d040405_P001	Maize	endoplasmic reticulum, vacuole	45.98	79.51
Os03t0793500-01	Rice	cytosol, mitochondrion	78.84	79.07
HORVU5Hr1G104450.1	Barley	mitochondrion	77.86	78.08
HORVU6Hr1G077100.8	Barley	mitochondrion	77.86	78.08
TraesCS5D01G438800.1	Wheat	mitochondrion	77.57	77.79
TraesCS5B01G433300.1	Wheat	mitochondrion	77.57	77.68
TraesCS5A01G431600.1	Wheat	mitochondrion	77.43	77.54
KXG34480	Sorghum	cytosol	77.72	77.39
Os07t0171300-01	Rice	cytosol, plastid	75.74	76.82
KRH52778	Soybean	nucleus	65.59	76.73
Zm00001d007889_P009	Maize	cytosol, plastid	76.16	76.7
TraesCS2D01G239500.1	Wheat	mitochondrion	75.46	75.89
TraesCS2A01G238600.1	Wheat	cytosol	75.46	75.89
Zm00001d002106_P001	Maize	extracellular	16.93	75.47
EER93310	Sorghum	mitochondrion, plastid	75.04	75.25
Zm00001d018904_P004	Maize	cytosol	76.16	74.28
CDY53253	Canola	plastid	79.13	73.62
Bra031961.1-P	Field mustard	cytosol	81.95	72.44
TraesCS5B01G433800.1	Wheat	cytosol	55.29	72.32
CDY50866	Canola	cytosol	81.38	72.31
KRH01814	Soybean	nucleus	67.98	71.73
KRH46874	Soybean	nucleus	67.7	71.43
TraesCS2B01G260100.1	Wheat	cytosol	51.48	70.19
KRG93028	Soybean	cytosol	66.15	70.1
KRH36274	Soybean	nucleus	66.15	69.79
KRH62090	Soybean	cytosol	65.02	68.4
HORVU5Hr1G104510.7	Barley	cytosol	58.11	67.87
KRH44285	Soybean	nucleus	66.43	66.24
KRH62093	Soybean	nucleus	66.29	66.2
KRH47219	Soybean	nucleus	66.71	65.42
TraesCS5D01G439600.1	Wheat	mitochondrion	62.76	63.3
Zm00001d021658_P001	Maize	mitochondrion	37.52	61.43
Zm00001d046903_P001	Maize	endoplasmic reticulum, extracellular	32.16	58.61
KRH12421	Soybean	cytosol	9.73	41.32
KRH12426	Soybean	cytosol	13.4	39.58
KRH02686	Soybean	nucleus	20.87	32.6
KRH19210	Soybean	nucleus	20.87	32.6
KRH34398	Soybean	nucleus	20.73	32.52
KRG92405	Soybean	cytosol	20.87	32.46
KRH10045	Soybean	nucleus	21.02	31.63
KRH23272	Soybean	cytosol	21.02	31.57
KRH19588	Soybean	cytosol, nucleus	19.89	31.13
KRH32213	Soybean	cytosol	19.75	30.97
KRH37421	Soybean	nucleus	19.89	30.92
KRH44105	Soybean	cytosol	20.73	30.88
KRG95693	Soybean	cytosol	20.31	30.84
KRH67417	Soybean	nucleus	20.31	30.77
KRH39332	Soybean	cytosol	18.34	30.52
KRH60238	Soybean	cytosol	18.48	30.47
KRH41527	Soybean	nucleus	18.34	30.23
KRH76321	Soybean	cytosol	18.34	30.09
KRH62054	Soybean	cytosol	17.49	29.04
KRH04915	Soybean	cytosol	17.21	28.71
KRH47076	Soybean	cytosol	15.23	28.65
KRH52721	Soybean	cytosol	17.21	28.5
KRH66363	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	9.31	25.88
KRH12422	Soybean	cytosol, nucleus	9.87	24.31

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100801967	MapMan:12.3.6.2	MapMan:18.4.4.2	EMBL:ACUP02009864	EnsemblPlantsGene:GLYMA_16G041500
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0008360	GO:GO:0009653
GO:GO:0009987	GO:GO:0016043	GO:GO:0016301	GO:GO:0016740	GO:GO:0018105	GO:GO:0019538
UniProt:I1ML29	InterPro:IPR000719	EnsemblPlants:KRH06716	ProteinID:KRH06716	ProteinID:KRH06716.1	InterPro:Kinase-like_dom_sf
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR11909	PANTHER:PTHR11909:SF131
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000233EBEC
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr16:-:3888459..3896399

Molecular Weight (calculated)

79001.5 Da

IEP (calculated)

9.394

GRAVY (calculated)

-0.431

Length

709 amino acids

Sequence
(BLAST)

001: MPELRSGARR SKRLGDLQPG PLPVDQGENW QQPAAPNRTR RRVGGGRGRG GNATAVGKGP SPAVPTRRTA AGRGRGARLI DLDPEPCEVL PEPVALGAPE
101: PVYNNVEVVA NNNIVMEGGS GDKVAGAEEE PSTTPVPERV QVGNSPIYKI ERKLGKGGFG QVYVGRRLSG GSDRTGPDAV EVALKFEHRN SKGCNYGPPY
201: EWQVYSTLNG CYGIPWVHYK GRQGDFYILV MDMLGPSLWD VWNSVGQQMS PNMVACIAVE AISILEKLHL KGFVHGDVKP ENFLLGQPGS AEDKKLYLID
301: LGLASRWKDA SSGLHVDYDQ RPDIFRGTIR YASVHAHLGR TGSRRDDLES LAYTLVFLIK GRLPWQGYQG DNKSFLVCKK KMATSPELMC CFVPAPFKQF
401: LEAVTNMRFD EEPNYAKLIS LFESLIEPCT PLRPIRIDGA LKVGQKRGRM LINLEEDEQP KKKVRLGSPA TQWISVYNAR RPMKQRYHYN VADTRLRQHV
501: DKGIEDGLYI SCVASAANLW ALIMDAGTGF SSQVYELSPA FLHKDWIMEQ WEKNYYISSI AGAVNGSSLV VMSKGTPYTQ QSYKVSESFP FKWINKKWKE
601: GFHVTSMTTA GSRWGVVMSR NAGYSDQVVE LDFLYPSEGI HRRWENGYRI TSMAATSDQA AFILSIPKRK LLDETQETLR TSAFPSTHVK EKWAKNLYIA
701: SICYGRTVC

Best Arabidopsis Sequence Match ( AT3G03940.1 )
(BLAST)

001: MPELRSGARR SRRLDEQPNP PLVEQAENIV LPPQTATRRR GGGRGRGNAA LAKGAAPPRP TAAGRGRGIR LTDLEPEPCE VRPAAGAIGA TEPALNRVEG
101: VADKDIAAEG GSAEKVVGME EDSSMGPVPE RVQVGNSPVY KTERKLGKGG FGQVYVGRRV SGGSDRIGAD AIEVALKLEH RNSKGCNFGP PYEWQVYNTL
201: NSCYGIPAVH HKGRQGDFYI LVMDMLGPSL WDVWNSLAQS MSPNMVACIA VEAISILEKL HMKGFVHGDV KPENFLLGQP GTADEKKLYL IDLGLASRWK
301: DSHSGQHVEY DQRPDVFRGT IRYASCHAHL GRTGSRRDDL ESLAYTLIFL MRGRLPWQGY QGDNKSFLVC KKKMSTSPEL MCCFCPPPFK LFLEAVTNMK
401: FDEEPNYAKL ISIFDTLIEP CAISRPIRID GALKVGQKRG RLLINLEEDE QPRKKIRIGS PATQWISVYN ARRPMKQRYH YNVADLRLAQ HVEKGNEDGL
501: FISCVASSAN LWAIIMDAGT GFSSQVYELS SVFLHKDWIM EQWEKNYYIS SIAGANNGSS LVVMAKGTPY TQQSYKVSDS FPFKWINKKW KEGFHVTSMT
601: TAGSRWGVVM SRNSGYSEQV VELDFLYPSE GIHRRWESGY RITSMAATAD QAALILSIPK RKITDETQET LRTSAFPSTH VKEKWAKNLY IASICYGRTV
701: C

Arabidopsis Description

Protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SQR8]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.