Factsheet for Solyc10g080700.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
cytosol 3
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400060832	Potato	cytosol	99.01	99.01
KRH06716	Soybean	nucleus	88.29	88.29
VIT_08s0007g07420.t01	Wine grape	cytosol	88.29	88.29
AT3G03940.1	Thale cress	cytosol, plastid	84.2	85.16
CDY42890	Canola	cytosol	83.36	84.43
AT5G18190.2	Thale cress	cytosol	82.23	84.37
CDY21155	Canola	cytosol	83.64	84.23
CDY38493	Canola	cytosol	81.95	84.2
Bra036426.1-P	Field mustard	cytosol	83.5	84.09
CDY29971	Canola	cytosol	83.36	84.07
CDX70801	Canola	cytosol	81.1	84.06
Bra002140.1-P	Field mustard	cytosol	81.81	83.94
CDY51243	Canola	cytosol	80.96	83.92
CDY25451	Canola	cytosol	81.52	83.77
Zm00001d005806_P001	Maize	cytosol	12.98	83.64
Bra006445.1-P	Field mustard	cytosol	79.97	83.51
Bra023667.1-P	Field mustard	cytosol	79.97	82.89
CDY02641	Canola	cytosol	80.11	82.8
Zm00001d040405_P001	Maize	endoplasmic reticulum, vacuole	45.98	79.51
Zm00001d042649_P001	Maize	mitochondrion	38.93	79.31
Os03t0793500-01	Rice	cytosol, mitochondrion	78.14	78.36
HORVU5Hr1G104450.1	Barley	mitochondrion	76.73	76.94
HORVU6Hr1G077100.8	Barley	mitochondrion	76.73	76.94
TraesCS5D01G438800.1	Wheat	mitochondrion	76.59	76.8
TraesCS5B01G433300.1	Wheat	mitochondrion	76.59	76.69
KXG34480	Sorghum	cytosol	77.01	76.69
TraesCS5A01G431600.1	Wheat	mitochondrion	76.45	76.55
Os07t0171300-01	Rice	cytosol, plastid	75.32	76.39
Zm00001d007889_P009	Maize	cytosol, plastid	75.18	75.71
TraesCS2A01G238600.1	Wheat	cytosol	74.89	75.32
TraesCS2D01G239500.1	Wheat	mitochondrion	74.75	75.18
EER93310	Sorghum	mitochondrion, plastid	74.61	74.82
CDY53253	Canola	plastid	79.97	74.41
Zm00001d018904_P004	Maize	cytosol	75.6	73.73
CDY50866	Canola	cytosol	82.65	73.43
Bra031961.1-P	Field mustard	cytosol	82.65	73.07
Zm00001d002106_P001	Maize	extracellular	16.36	72.96
Solyc12g100310.1.1	Tomato	nucleus	61.21	72.09
TraesCS5B01G433800.1	Wheat	cytosol	54.73	71.59
TraesCS2B01G260100.1	Wheat	cytosol	51.34	70.0
Solyc12g095830.1.1	Tomato	nucleus	67.7	68.09
Solyc01g006120.2.1	Tomato	nucleus	65.02	67.6
HORVU5Hr1G104510.7	Barley	cytosol	57.83	67.55
Solyc11g070170.1.1	Tomato	cytosol, mitochondrion, nucleus, plastid	64.46	66.04
TraesCS5D01G439600.1	Wheat	mitochondrion	61.92	62.45
Solyc08g066400.1.1	Tomato	cytosol	29.05	61.86
Zm00001d021658_P001	Maize	mitochondrion	37.38	61.2
Zm00001d046903_P001	Maize	endoplasmic reticulum, extracellular	32.44	59.13
Solyc08g066410.1.1	Tomato	cytosol	28.63	58.84
Solyc09g090230.1.1	Tomato	cytosol, nucleus	5.78	35.34
Solyc12g007280.1.1	Tomato	cytosol	17.07	32.27
Solyc06g053560.2.1	Tomato	cytosol	20.03	32.13
Solyc03g121820.2.1	Tomato	cytosol, nucleus	21.02	31.7
Solyc06g008320.2.1	Tomato	cytosol, nucleus	20.31	31.51
Solyc05g016410.2.1	Tomato	cytosol, nucleus	20.73	31.34
Solyc09g066440.2.1	Tomato	cytosol	20.31	31.3
Solyc06g062790.2.1	Tomato	cytosol, nucleus	20.59	31.26
Solyc06g083830.2.1	Tomato	cytosol	20.17	31.15
Solyc09g090250.2.1	Tomato	nucleus	20.17	30.82
Solyc07g040720.2.1	Tomato	nucleus	20.31	30.51
Solyc09g090240.1.1	Tomato	cytosol	8.18	29.74
Solyc08g066870.2.1	Tomato	cytosol, nucleus	15.94	29.58

Protein Annotations

Gene3D:1.10.510.10	MapMan:12.3.6.2	MapMan:18.4.4.2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0008360	GO:GO:0009653	GO:GO:0009987	GO:GO:0016043	GO:GO:0016301
GO:GO:0016740	GO:GO:0018105	GO:GO:0019538	InterPro:IPR000719	UniProt:K4D2W0	InterPro:Kinase-like_dom_sf
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR11909	PANTHER:PTHR11909:SF131
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc10g080700.1
EnsemblPlants:Solyc10g080700.1.1	UniParc:UPI0002769605	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr10:-:61911363..61917068

Molecular Weight (calculated)

78778.3 Da

IEP (calculated)

9.603

GRAVY (calculated)

-0.439

Length

709 amino acids

Sequence
(BLAST)

001: MPELRSGARR SKRLGDLQPA PQPVGQEENL VLPTQNRTRR RGGGGGRGRG NATAIGKGPS GTRGRPSGAG RGRGIRLIDL DPEPPCEGLP QVAPVGVAEP
101: AFNRVDGAAD KRIAMDGGGS PDKVMGVEEE AGTTPVPDRV QVGNSPVYKT ERKLGKGGFG QVYVGRRTSG GTERTGPDAV EVALKFEHRN SKGCNYGPPY
201: EWQVYNTLNG CYGIPWVHFK GRQGDFYILV MDMLGPSLWD VWNSLGQSMS PNMVACIAVE AISILEKLHL KGFVHGDVKP ENFLLGLPGS QDEKKLYLID
301: LGLASRWKDA ASGMHVEYDQ RPDIFRGTIR YASVHAHLGR TGSRRDDLES LAYTLIFLIK GRLPWQGYQG DNKSFLVCKK KMATSPELMC CFCPAPFKQF
401: LEAVTNMKFD EEPNYAKLIS FFESLIEPVT SLRPIRIDGA LKVGQKRGRL LINLEEDEQP KKKVRLGSPA TQWISVYNAR RPMKQRYHYN VADTRLRQHV
501: DKGNEDGLYI SCVASAANLW ALIMDAGTGF SSQVYELSAA FLHKDWIMEQ WEKNYYISSI AGAANGSSLV VMSKGTPYTQ QSYKVSESFP FKWINKKWKE
601: GFHVTSMTTA GSRWGVVMSR NAGYAEQVVE LDFLYPSEGI HRRWEGGFRI TSMAATADQA AFILSIPRRK MIDETQETLR TSAFPSTHVK EKWSKNLYIA
701: SICYGRTVC

Best Arabidopsis Sequence Match ( AT3G03940.1 )
(BLAST)

001: MPELRSGARR SRRLDEQPNP PLVEQAENIV LPPQTATRRR GGGRGRGNAA LAKGAAPPRP TAAGRGRGIR LTDLEPEPCE VRPAAGAIGA TEPALNRVEG
101: VADKDIAAEG GSAEKVVGME EDSSMGPVPE RVQVGNSPVY KTERKLGKGG FGQVYVGRRV SGGSDRIGAD AIEVALKLEH RNSKGCNFGP PYEWQVYNTL
201: NSCYGIPAVH HKGRQGDFYI LVMDMLGPSL WDVWNSLAQS MSPNMVACIA VEAISILEKL HMKGFVHGDV KPENFLLGQP GTADEKKLYL IDLGLASRWK
301: DSHSGQHVEY DQRPDVFRGT IRYASCHAHL GRTGSRRDDL ESLAYTLIFL MRGRLPWQGY QGDNKSFLVC KKKMSTSPEL MCCFCPPPFK LFLEAVTNMK
401: FDEEPNYAKL ISIFDTLIEP CAISRPIRID GALKVGQKRG RLLINLEEDE QPRKKIRIGS PATQWISVYN ARRPMKQRYH YNVADLRLAQ HVEKGNEDGL
501: FISCVASSAN LWAIIMDAGT GFSSQVYELS SVFLHKDWIM EQWEKNYYIS SIAGANNGSS LVVMAKGTPY TQQSYKVSDS FPFKWINKKW KEGFHVTSMT
601: TAGSRWGVVM SRNSGYSEQV VELDFLYPSE GIHRRWESGY RITSMAATAD QAALILSIPK RKITDETQET LRTSAFPSTH VKEKWAKNLY IASICYGRTV
701: C

Arabidopsis Description

Protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SQR8]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.