Factsheet for Solyc12g095830.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400075580	Potato	cytosol	96.45	96.32
KRH52778	Soybean	nucleus	77.59	90.26
GSMUA_Achr6P26340_001	Banana	cytosol	73.9	85.97
GSMUA_Achr9P06110_001	Banana	cytosol	72.91	84.68
Os01t0744300-01	Rice	cytosol, nucleus, plastid	71.49	84.42
GSMUA_Achr2P15650_001	Banana	cytosol	71.63	83.47
EES19200	Sorghum	cytosol	71.77	83.36
Os05t0200500-02	Rice	cytosol	71.77	83.36
CDX76739	Canola	cytosol	70.92	83.33
Bra007778.1-P	Field mustard	cytosol	70.78	83.17
Zm00001d037744_P001	Maize	cytosol	71.49	83.03
TraesCS1B01G143100.4	Wheat	cytosol	71.49	83.03
VIT_04s0008g00160.t01	Wine grape	cytosol	81.7	82.88
CDY11509	Canola	cytosol	66.24	82.65
TraesCS1D01G130400.2	Wheat	cytosol	71.06	82.54
TraesCS1A01G123900.2	Wheat	cytosol	71.35	82.46
EES00121	Sorghum	cytosol	70.92	82.1
KRH62090	Soybean	cytosol	78.3	81.9
Zm00001d039409_P004	Maize	cytosol	70.92	81.83
CDY21505	Canola	cytosol	71.35	81.79
GSMUA_AchrUn_...	Banana	cytosol	43.12	81.28
Solyc11g070170.1.1	Tomato	cytosol, mitochondrion, nucleus, plastid	79.29	80.78
Zm00001d008863_P004	Maize	cytosol	57.3	80.16
TraesCS3A01G311600.3	Wheat	cytosol	68.79	79.9
HORVU3Hr1G027270.1	Barley	cytosol	68.65	79.74
VIT_09s0002g03680.t01	Wine grape	cytosol	79.57	79.69
TraesCS3D01G142700.1	Wheat	cytosol	68.65	78.96
TraesCS3B01G160600.1	Wheat	cytosol	68.65	78.96
GSMUA_Achr4P01010_001	Banana	plastid	76.45	78.8
KRH62093	Soybean	nucleus	78.72	78.17
Os01t0198200-01	Rice	cytosol, mitochondrion, nucleus, vacuole	69.36	76.89
TraesCS3D01G275000.1	Wheat	cytosol	71.91	76.24
TraesCS3B01G308800.1	Wheat	cytosol	71.49	75.9
TraesCS3A01G275100.1	Wheat	cytosol	71.77	75.75
AT2G25760.2	Thale cress	cytosol	72.48	75.59
OQU79450	Sorghum	nucleus	63.69	75.08
Solyc12g100310.1.1	Tomato	nucleus	63.97	74.92
HORVU3Hr1G070920.2	Barley	mitochondrion	70.21	73.99
Zm00001d012761_P002	Maize	cytosol, mitochondrion, nucleus, plastid	68.09	70.9
Solyc01g006120.2.1	Tomato	nucleus	68.51	70.82
GSMUA_Achr9P00060_001	Banana	cytosol	22.7	70.48
Solyc08g066410.1.1	Tomato	cytosol	33.48	68.41
Solyc10g080700.1.1	Tomato	nucleus	68.09	67.7
Solyc08g066400.1.1	Tomato	cytosol	31.77	67.27
GSMUA_AchrUn_...	Banana	cytosol	17.3	66.3
HORVU1Hr1G028450.16	Barley	cytosol	63.55	62.75
GSMUA_Achr9P00070_001	Banana	extracellular	16.17	51.58
Solyc09g090230.1.1	Tomato	cytosol, nucleus	6.1	37.07
Solyc06g053560.2.1	Tomato	cytosol	20.99	33.48
Solyc12g007280.1.1	Tomato	cytosol	17.73	33.33
Solyc06g008320.2.1	Tomato	cytosol, nucleus	21.28	32.82
Solyc06g083830.2.1	Tomato	cytosol	21.28	32.68
Solyc09g066440.2.1	Tomato	cytosol	21.13	32.39
Solyc09g090250.2.1	Tomato	nucleus	20.99	31.9
Solyc05g016410.2.1	Tomato	cytosol, nucleus	20.85	31.34
Solyc09g090240.1.1	Tomato	cytosol	8.65	31.28
Solyc03g121820.2.1	Tomato	cytosol, nucleus	20.85	31.28
Solyc06g062790.2.1	Tomato	cytosol, nucleus	20.71	31.26
Solyc07g040720.2.1	Tomato	nucleus	20.57	30.72
Solyc08g066870.2.1	Tomato	cytosol, nucleus	16.17	29.84

Protein Annotations

Gene3D:1.10.510.10	MapMan:12.3.6.2	MapMan:18.4.4.2	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0008360	GO:GO:0009653	GO:GO:0009987	GO:GO:0016043
GO:GO:0016301	GO:GO:0016740	GO:GO:0018105	GO:GO:0019538	InterPro:IPR000719	UniProt:K4DH56
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR11909
PANTHER:PTHR11909:SF73	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:Solyc12g095830.1	EnsemblPlants:Solyc12g095830.1.1	UniParc:UPI0002769A05	SEG:seg	:	:

Description

No Description!

Coordinates

chr12:+:64946550..64950801

Molecular Weight (calculated)

79417.2 Da

IEP (calculated)

9.114

GRAVY (calculated)

-0.627

Length

705 amino acids

Sequence
(BLAST)

001: MPQLRSGVRR GRKPIAAIEP EENNDNENKR VTRRTTVART TRQRGAGGVR VGGRKKKETD NEEKEVVPVG DENTVRRTAS REEDKEKKEV EKEEEVGEKQ
101: MDEYDSGGQS GDKGLAAEDE GSTAPLPERV QVGGSPAYRI DRKLGKGGFG QVFVGRRANP PNPHERTGPG AVEVALKFEH RSSKGCNHGP PYEWQVYNAL
201: GGSHGIPRVH YKGRQGDYYI MVMDMLGPSL WDVWNNNAHT MSVEMVACIA IEAISILEKL HSRGYVHGDV KPENFLLGTP GTPDEKKLFL VDLGLATRWR
301: DASTGLHVEY DQRPDVFRGT VRYASVHAHL GRTGSRRDDL ESLAYTLIFL LRGRLPWQGY QGENKGFLVC KKKMASSPET LCCFCPAPFK HFVEYVVNLK
401: FDEEPNYARY ISLFDGVVGP NPEIRPINTD GAQKLIYQVG QKRGRLTMEE EDDEQPKKKV RMGMPATQWI SVYNARRPMK QRYHYNVADM RLAQHIEKGN
501: EDGLFISSVA SSSSLWALIM DAGTGFSAQV YELSPLFLHK EWIMEQWEKN YYISAIAGAT NGSSLVIMSK GTQYLQQSYK VGESFPFKWI NKKWREGFYV
601: TAMATAGSRW AIVMSRGAGF SDQVVELDFL YPSEGVHRRW DAGYRITSTA ATWDQAALVL SVPRRKPADE TQETLRTSAF PSTHVKEKWA KNLYLASICY
701: GRTVS

Best Arabidopsis Sequence Match ( AT2G25760.1 )
(BLAST)

001: MPELRSNARR DRDKKNPKQN PIALKQSPVR RNPRRQLKKK VVVKEAIVAA EKTTPLVKEE EEQIRVSSED KKMDENDSGG QAAPVPDDEG NAPPLPEKVQ
101: VGNSPMYKLD RKLGKGGFGQ VYVGRKMGTS TSNARFGPGA LEVALKFEHR TSKGCNYGPP YEWQVYNALG GSHGVPRVHF KGRQGDFYVM VMDILGPSLW
201: DVWNSTTQAM STEMVACIAI EAISILEKMH SRGYVHGDVK PENFLLGPPG TPEEKKLFLV DLGLASKWRD TATGLHVEYD QRPDVFRGTV RYASVHAHLG
301: RTCSRRDDLE SLAYTLVFLL RGRLPWQGYQ GENKGFLVCK KKMATSPETL CCFCPQPFRQ FVEYVVNLKF DEEPDYAKYV SLFDGIVGPN PDIRPINTEG
401: AQKLIHQVGQ KRGRLTMDEE DEQPTKKIRL GMPATQWISI YSAHRPMKQR YHYNVTDTRL AQHIEKGNED GLFISSVASC TDLWALIMDA GSGFTDQVYQ
501: LSPSFLHKEW IMEQWEKNYY ITAVAGANSG NSFVVMSKGT QYLQQSYKVS DSFPFKWINK KWREGFYVTS MATAGSKWGI VMSRGASFSD QVIELDFLYP
601: SEGIHRRWEN GYRITSVAAT WDQAAFVLSV PRRKLTDETQ ETLRTSAFPS NHVKEKWGKN LYIASICYGR TVS

Arabidopsis Description

Protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4ISN5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.