Factsheet for TraesCS1D01G130400.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G143100.4	Wheat	cytosol	99.18	99.18
TraesCS1A01G123900.2	Wheat	cytosol	98.68	98.2
EES19200	Sorghum	cytosol	94.07	94.07
Zm00001d037744_P001	Maize	cytosol	93.08	93.08
Os05t0200500-02	Rice	cytosol	92.42	92.42
GSMUA_Achr2P15650_001	Banana	cytosol	84.51	84.79
TraesCS3D01G142700.1	Wheat	cytosol	85.5	84.67
KRH52778	Soybean	nucleus	83.86	83.99
Bra007778.1-P	Field mustard	cytosol	78.58	79.5
VIT_19s0085g00700.t01	Wine grape	cytosol	15.82	79.34
CDX76739	Canola	cytosol	78.42	79.33
CDY11509	Canola	cytosol	73.81	79.29
CDY21505	Canola	cytosol	78.75	77.72
TraesCS5D01G000900.1	Wheat	cytosol	74.96	76.21
KRH62090	Soybean	cytosol	82.87	74.63
TraesCS3D01G275000.1	Wheat	cytosol	81.38	74.29
VIT_04s0008g00160.t01	Wine grape	cytosol	85.01	74.24
VIT_09s0002g03680.t01	Wine grape	cytosol	84.35	72.73
PGSC0003DMT400047803	Potato	cytosol, mitochondrion, nucleus, plastid	81.05	71.41
AT2G25760.2	Thale cress	cytosol	79.41	71.3
Solyc11g070170.1.1	Tomato	cytosol, mitochondrion, nucleus, plastid	81.05	71.1
Solyc12g095830.1.1	Tomato	nucleus	82.54	71.06
KRH62093	Soybean	nucleus	83.03	70.99
PGSC0003DMT400075580	Potato	cytosol	80.23	68.98
HORVU1Hr1G028450.16	Barley	cytosol	80.89	68.77
KRH44285	Soybean	nucleus	80.07	68.35
KRH47219	Soybean	nucleus	80.23	67.36
Solyc08g066400.1.1	Tomato	cytosol	35.42	64.56
TraesCS2D01G239500.1	Wheat	mitochondrion	71.5	61.56
TraesCS5D01G438800.1	Wheat	mitochondrion	71.33	61.24
TraesCS3D01G308400.3	Wheat	nucleus	69.03	58.93
Solyc08g066410.1.1	Tomato	cytosol	32.78	57.68
TraesCS5D01G439600.1	Wheat	mitochondrion	61.28	52.92
TraesCS3D01G162900.1	Wheat	cytosol	21.42	32.18
TraesCS3D01G252000.2	Wheat	cytosol	24.88	31.92
TraesCS1D01G450800.1	Wheat	cytosol	17.46	31.18
TraesCS6D01G210400.1	Wheat	cytosol	23.89	31.12
TraesCS5D01G434700.3	Wheat	cytosol	23.89	30.27
TraesCS1D01G450400.1	Wheat	cytosol	23.56	30.17
TraesCS6D01G362500.1	Wheat	cytosol	23.39	30.02
TraesCS6D01G174800.2	Wheat	cytosol	20.26	30.0
TraesCS3D01G208900.6	Wheat	cytosol	24.05	29.92
TraesCS1D01G450300.1	Wheat	mitochondrion, plastid	8.07	7.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:12.3.6.2	MapMan:18.4.4.2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR11909	PANTHER:PTHR11909:SF293
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS1D01G130400	EnsemblPlants:TraesCS1D01G130400.2
TIGR:cd14016	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1D:+:143950557..143959923

Molecular Weight (calculated)

68392.3 Da

IEP (calculated)

8.534

GRAVY (calculated)

-0.449

Length

607 amino acids

Sequence
(BLAST)

001: MDDGDSVARS ADKDDAPPGD DGSSTPLPET IQIGNSPTYK LDRKLGKGGF GQVYVGRRIS TPSLIDRTPG ANALEVAIKF EHRTSKGCNY GAPYEWQVYN
101: TLSGIHGVPR VHYKGKQSEY YIMIMDMLGP SLWDVWNNNS HSMSVEMVAC IAIEAISILE KMHSKGYVHG DVKPENFLLG PPGTVQDKKL FLVDLGLATK
201: WKDTGTGELV EYDQRPDVFR GTVRYASVHA HLGRTGSRRD DLESLAYTLV FLLRGRLPWQ GYQGENKGFL VCKKKMATSP ESLCCFCPQP FRQFVEYVVN
301: LKFDEEPNYA KCISLFDGIV GPNPDIRPIN TDGAQKLIYQ VGQKRGRLMM EEDDDDQPKK KIRMGMPSTQ WVSVYNARRP MKQRYHYNVA DGRLAQHISK
401: GNEDGLFISS VASCSNLWAL IMDAGTGFTS QVYELSPYFL HKEWIMEQWE KNFYVTALAG ANNGSSLVVM SRGTQYAQQS YKVSDSFPFK WINKKWKEGF
501: YVTAMATAGS RWAVVVSRNA GFVDQVVELD FLYPSEGVHR RWDNGYRITA TAATWDQTAL ILSIPRRKPA DETQETLRTS AFPSQHVKEK WAKNLYLASI
601: CYGRTVS

Best Arabidopsis Sequence Match ( AT2G25760.1 )
(BLAST)

001: MPELRSNARR DRDKKNPKQN PIALKQSPVR RNPRRQLKKK VVVKEAIVAA EKTTPLVKEE EEQIRVSSED KKMDENDSGG QAAPVPDDEG NAPPLPEKVQ
101: VGNSPMYKLD RKLGKGGFGQ VYVGRKMGTS TSNARFGPGA LEVALKFEHR TSKGCNYGPP YEWQVYNALG GSHGVPRVHF KGRQGDFYVM VMDILGPSLW
201: DVWNSTTQAM STEMVACIAI EAISILEKMH SRGYVHGDVK PENFLLGPPG TPEEKKLFLV DLGLASKWRD TATGLHVEYD QRPDVFRGTV RYASVHAHLG
301: RTCSRRDDLE SLAYTLVFLL RGRLPWQGYQ GENKGFLVCK KKMATSPETL CCFCPQPFRQ FVEYVVNLKF DEEPDYAKYV SLFDGIVGPN PDIRPINTEG
401: AQKLIHQVGQ KRGRLTMDEE DEQPTKKIRL GMPATQWISI YSAHRPMKQR YHYNVTDTRL AQHIEKGNED GLFISSVASC TDLWALIMDA GSGFTDQVYQ
501: LSPSFLHKEW IMEQWEKNYY ITAVAGANSG NSFVVMSKGT QYLQQSYKVS DSFPFKWINK KWREGFYVTS MATAGSKWGI VMSRGASFSD QVIELDFLYP
601: SEGIHRRWEN GYRITSVAAT WDQAAFVLSV PRRKLTDETQ ETLRTSAFPS NHVKEKWGKN LYIASICYGR TVS

Arabidopsis Description

Protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4ISN5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.