Factsheet for TraesCS3D01G208900.6

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G238800.4	Wheat	cytosol	98.36	98.36
TraesCS3A01G207000.2	Wheat	cytosol	93.65	97.86
HORVU3Hr1G049480.6	Barley	cytosol	92.62	95.97
Os01t0570500-01	Rice	plasma membrane	87.09	90.04
TraesCS1D01G450400.1	Wheat	cytosol	81.35	83.76
EES00938	Sorghum	cytosol	76.23	79.15
TraesCS3D01G252000.2	Wheat	cytosol	71.31	73.57
AT4G08800.1	Thale cress	cytosol	42.83	73.33
CDX70305	Canola	cytosol	42.83	70.61
AT2G19470.1	Thale cress	cytosol	59.43	66.97
Bra036721.1-P	Field mustard	cytosol	58.81	65.68
TraesCS6D01G174800.2	Wheat	cytosol	48.98	58.29
TraesCS6D01G362500.1	Wheat	cytosol	56.35	58.14
TraesCS6D01G210400.1	Wheat	cytosol	54.1	56.65
TraesCS3D01G162900.1	Wheat	cytosol	46.52	56.19
TraesCS5D01G434700.3	Wheat	cytosol	52.46	53.44
TraesCS1D01G450800.1	Wheat	cytosol	36.68	52.65
TraesCS5D01G000900.1	Wheat	cytosol	29.92	24.46
TraesCS1D01G130400.2	Wheat	cytosol	29.92	24.05
TraesCS3D01G142700.1	Wheat	cytosol	30.12	23.98
TraesCS3D01G275000.1	Wheat	cytosol	30.74	22.56
TraesCS5D01G438800.1	Wheat	mitochondrion	31.56	21.78
TraesCS2D01G239500.1	Wheat	mitochondrion	31.15	21.56
TraesCS3D01G308400.3	Wheat	nucleus	30.33	20.82
TraesCS5D01G439600.1	Wheat	mitochondrion	29.71	20.63
TraesCS1D01G450300.1	Wheat	mitochondrion, plastid	18.44	12.86

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.4.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR11909	PANTHER:PTHR11909:SF162
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS3D01G208900
EnsemblPlants:TraesCS3D01G208900.6	TIGR:cd14125	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3D:+:275994913..275998703

Molecular Weight (calculated)

55294.7 Da

IEP (calculated)

10.308

GRAVY (calculated)

-0.620

Length

488 amino acids

Sequence
(BLAST)

001: MEPRVGNKYR LGRKLGSGSF GEIYLGTNVQ TNEEVAIKLE NVKTKHPQLL YESKLYRVLQ GGTGISNVKW FGVEGDYNVL VMDVLGPSLE DLFSFCNRKL
101: SLKTVLMLAD QMINRVEFIH SKSFLHRDIK PDNFLMGLGK RANQVYMIDF GLAKKYRDTS THQHIPYREN KNLTGTARYA SVSTHLGIEQ SRRDDMESLG
201: YVLMYFLRGS LPWQGLKAGT KKQKYEKISE RKVATSIEAL CRGYPSEFQS FFHYCRSLRF EDSPDYQYLK RLFRDLFIRE GFQFDYVFDW TILKYQQSQM
301: TSVPRRAIPA AAGQSSGMAP IASNNRLSVE QGRKLFPVIL LRSSTHPVSA TEEGRRSGWS DDPTRRQVPP TGINAGSLSK QKSPVRPDVS APKEAVLSSS
401: TFLGRSGVSS RRPAVSSSRD LPSSEAEPSR SRAPDVSPGT FQRNSAPRRT SQTLDYSDPR HKSNSNNYES TIRGIRGLNF NANDRIHY

Best Arabidopsis Sequence Match ( AT1G72710.1 )
(BLAST)

001: MEPRVGNKFR LGRKIGGGSF GEIYLGTNIQ TNEEVAIKLE NVKTKHPQLL YESKLYKVLQ GGTGVPNVKW YGVEGDYNVL VIDLLGPSLE DLFNFCSRKL
101: SLKTVLMLAD QMINRIEFVH QKSFLHRDIK PDNFLMGLGR RANQVYVIDF GLAKKYRDSN HQHIPYRENK NLTGTARYAS MNTHLGIEQS RRDDLESLGF
201: VLMYFLKGSL PWQGLKAGNK KQKYEKISEK KVSTSIEALC RGYPSEFASY FHYCRSLRFD DKPDYAYLKR LFRDLFIREG FQFDYVFDWT ILKYQQSQIS
301: TPPPRHHGPV VGPSSALPPA ITSAERPSGG DEARPSGWSS GIPRRNSGQI FNSGSLAKQK APVSSDPAIS KDVVLSSSSF LRATGSSRRA AVSSSREAAV
401: LGTDSEPSNP QIVEAGSGSN SKIPVSRNSP IVSSEINKLS SPSRATTSVM KNYEANLKGI ESLHF

Arabidopsis Description

CKL2Casein kinase 1-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAI5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.