Factsheet for TraesCS6D01G210400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G256000.1	Wheat	cytosol	99.14	99.14
TraesCS6A01G225600.1	Wheat	cytosol	98.5	98.5
HORVU6Hr1G058230.6	Barley	cytosol	98.07	98.07
Os02t0622100-01	Rice	nucleus	90.56	91.14
EES05449	Sorghum	cytosol	82.83	83.01
Zm00001d017261_P006	Maize	cytosol	84.12	80.0
Zm00001d051135_P005	Maize	cytosol	81.55	75.85
VIT_07s0005g03710.t01	Wine grape	cytosol	73.61	74.89
PGSC0003DMT400065568	Potato	cytosol	73.39	74.84
Solyc06g083830.2.1	Tomato	cytosol	73.18	74.29
PGSC0003DMT400051696	Potato	cytosol	72.96	74.07
Solyc09g066440.2.1	Tomato	cytosol	72.96	73.91
Solyc06g008320.2.1	Tomato	cytosol, nucleus	72.1	73.52
PGSC0003DMT400026692	Potato	cytosol	72.53	73.48
GSMUA_Achr3P04680_001	Banana	cytosol	74.03	73.4
GSMUA_Achr10P...	Banana	cytosol	72.53	72.53
GSMUA_AchrUn_...	Banana	cytosol	72.1	72.41
GSMUA_Achr5P14540_001	Banana	cytosol	72.53	71.46
GSMUA_Achr9P13290_001	Banana	cytosol	75.32	70.2
TraesCS6D01G362500.1	Wheat	cytosol	70.17	69.13
TraesCS5D01G434700.3	Wheat	cytosol	71.03	69.1
TraesCS3D01G252000.2	Wheat	cytosol	58.15	57.29
TraesCS3D01G162900.1	Wheat	cytosol	49.57	57.18
TraesCS1D01G450400.1	Wheat	cytosol	56.87	55.91
TraesCS6D01G174800.2	Wheat	cytosol	48.5	55.12
TraesCS3D01G208900.6	Wheat	cytosol	56.65	54.1
TraesCS1D01G450800.1	Wheat	cytosol	35.84	49.12
TraesCS3D01G142700.1	Wheat	cytosol	31.76	24.14
TraesCS1D01G130400.2	Wheat	cytosol	31.12	23.89
TraesCS5D01G000900.1	Wheat	cytosol	29.61	23.12
TraesCS3D01G275000.1	Wheat	cytosol	30.47	21.35
TraesCS5D01G438800.1	Wheat	mitochondrion	30.9	20.37
TraesCS2D01G239500.1	Wheat	mitochondrion	28.97	19.15
TraesCS3D01G308400.3	Wheat	nucleus	28.54	18.71
TraesCS5D01G439600.1	Wheat	mitochondrion	28.11	18.63
TraesCS1D01G450300.1	Wheat	mitochondrion, plastid	18.03	12.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.4.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009409	GO:GO:0009628	GO:GO:0009653	GO:GO:0009719	GO:GO:0009741	GO:GO:0009826
GO:GO:0009850	GO:GO:0009987	GO:GO:0016043	GO:GO:0016049	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0040007	GO:GO:0048364	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR11909	PANTHER:PTHR11909:SF200	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS6D01G210400	EnsemblPlants:TraesCS6D01G210400.1
TIGR:cd14125	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6D:-:296863864..296871436

Molecular Weight (calculated)

52772.9 Da

IEP (calculated)

10.294

GRAVY (calculated)

-0.639

Length

466 amino acids

Sequence
(BLAST)

001: MEHVIGGKFK LGRKIGSGSF GELYLGVNIQ SSEEVAIKLE SVKSRHPQLH YESKLYMLLQ GGMGIPHLKW FGVDGEYNVM VIDLLGPSLE DLFNYCNRKF
101: TLKTVLLLAD QMIARVEYMH SRGFLHRDIK PDNFLMGLGR KASQVYVIDY GLAKKYRDLQ THKHIPYREN KNLTGTARYA SVNTHLGVEQ SRRDDLESLG
201: YVLMYFIRGS LPWQGLKAGT KKQKYDKISE KKMLTPVEVL CKSYPSEFVS YFHYCRSLRF EDKPDYSYLK KLFRDLFIRE GYQSDHIFDW TVSRQVAENN
301: RLRPSGRTAG LVGPSAERAE RIAARQDVPD RLSGSVDTFA RRTGSGSGHH GENTKHRTLL DTLLAPKMAA DSDKRRPTSS RNGSTSRKAL LSSSRPSSGE
401: PSDPTRTSHL IPTSSGSSRP STTQRLHQST GLEARSSSLS KTARNVHDDP TIRTFERLTI SADRRK

Best Arabidopsis Sequence Match ( AT1G03930.1 )
(BLAST)

001: MDLVIGGKFK LGRKIGSGSF GELYLGINVQ TGEEVAVKLE SVKTKHPQLH YESKLYMLLQ GGTGVPNLKW YGVEGDYNVM VIDLLGPSLE DLFNYCNRKL
101: SLKTVLMLAD QLINRVEFMH TRGFLHRDIK PDNFLMGLGR KANQVYIIDF GLGKKYRDLQ THRHIPYREN KNLTGTARYA SVNTHLGVEQ SRRDDLEALG
201: YVLMYFLKGS LPWQGLKAGT KKQKYDRISE KKVATPIEVL CKNQPSEFVS YFRYCRSLRF DDKPDYSYLK RLFRDLFIRE GYQFDYVFDW TVLKYPQIGS
301: SSGSSSRTRN HTTANPGLTA GASLEKQERI AGKETRENRF SGAVEAFSRR HPATSTTRDR SASRNSVDGP LSKHPPGDSE RPRSSSRYGS SSRRAIPSSS
401: RPSSAGGPSD SRSSSRLVTS TGGVGTVSNR ASTSQRIQAG NESRTSSFSR AARNTREDPL RRSLELLTLR K

Arabidopsis Description

CKL9Casein kinase 1-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZWB3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.