Factsheet for HORVU6Hr1G058230.6

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G256000.1	Wheat	cytosol	98.5	98.5
TraesCS6D01G210400.1	Wheat	cytosol	98.07	98.07
TraesCS6A01G225600.1	Wheat	cytosol	97.42	97.42
Os02t0622100-01	Rice	nucleus	90.56	91.14
EES05449	Sorghum	cytosol	83.26	83.44
Zm00001d017261_P006	Maize	cytosol	84.55	80.41
Zm00001d051135_P005	Maize	cytosol	81.97	76.25
VIT_07s0005g03710.t01	Wine grape	cytosol	73.82	75.11
PGSC0003DMT400065568	Potato	cytosol	73.39	74.84
Solyc06g083830.2.1	Tomato	cytosol	73.18	74.29
PGSC0003DMT400051696	Potato	cytosol	72.96	74.07
Solyc09g066440.2.1	Tomato	cytosol	72.96	73.91
GSMUA_Achr3P04680_001	Banana	cytosol	74.25	73.62
Solyc06g008320.2.1	Tomato	cytosol, nucleus	72.1	73.52
PGSC0003DMT400026692	Potato	cytosol	72.53	73.48
GSMUA_Achr10P...	Banana	cytosol	72.96	72.96
GSMUA_AchrUn_...	Banana	cytosol	72.32	72.63
GSMUA_Achr5P14540_001	Banana	cytosol	72.75	71.67
GSMUA_Achr9P13290_001	Banana	cytosol	75.32	70.2
HORVU5Hr1G103860.19	Barley	cytosol	60.52	67.3
HORVU3Hr1G066800.6	Barley	cytosol	58.58	57.59
HORVU3Hr1G049480.6	Barley	cytosol	56.44	55.84
HORVU1Hr1G094920.5	Barley	cytosol	56.65	55.58
HORVU1Hr1G095020.1	Barley	cytosol	21.67	55.49
HORVU0Hr1G016190.11	Barley	cytosol	43.99	52.3
HORVU3Hr1G031560.1	Barley	cytosol, plastid	49.14	48.11
HORVU3Hr1G027270.1	Barley	cytosol	31.97	24.55
HORVU5Hr1G000060.5	Barley	cytosol	28.54	22.35
HORVU5Hr1G104510.7	Barley	cytosol	27.9	21.42
HORVU3Hr1G070920.2	Barley	mitochondrion	30.26	21.08
HORVU6Hr1G077100.8	Barley	mitochondrion	31.33	20.65
HORVU5Hr1G104450.1	Barley	mitochondrion	31.33	20.65
HORVU3Hr1G075540.1	Barley	cytosol, nucleus, plastid	29.61	19.88
HORVU1Hr1G028450.16	Barley	cytosol	27.04	17.65

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.4.1	EMBL:AK363675	UniProt:F2DIF7	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009409	GO:GO:0009628	GO:GO:0009653
GO:GO:0009719	GO:GO:0009741	GO:GO:0009826	GO:GO:0009850	GO:GO:0009987	GO:GO:0016043
GO:GO:0016049	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0040007	GO:GO:0048364
EnsemblPlantsGene:HORVU6Hr1G058230	EnsemblPlants:HORVU6Hr1G058230.6	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR11909	PANTHER:PTHR11909:SF200	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00020064B7	SEG:seg	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DIF7]

Coordinates

chrchr6H:+:380785406..380794410

Molecular Weight (calculated)

52832.0 Da

IEP (calculated)

10.294

GRAVY (calculated)

-0.638

Length

466 amino acids

Sequence
(BLAST)

001: MEHVIGGKFK LGRKIGSGSF GELYLGVNIQ SGEEVAIKLE SVKSRHPQLH YESKLYMLLQ GGMGIPHLKW FGVDGEYNVM VIDLLGPSLE DLFNYCNRKF
101: TLKTVLLLAD QMIARVEYMH SRGFLHRDIK PDNFLMGLGR KASQVYVIDY GLAKKYRDLQ THKHIPYREN KNLTGTARYA SVNTHLGVEQ SRRDDLESLG
201: YVLMYFIRGS LPWQGLKAGT KKQKYDKISE KKMLTPVEVL CKSYPSEFVS YFHYCRSLRF EDKPDYNYLK KLFRDLFIRE GYQSDHIFDW TVSRQVAENN
301: RLRPSGRTAG LVGPSAERAE RVAARQDVPD RFSGSVDTFA RRTGSGSGHH AENTKHRTLL DSLLAPKMAV DSDKRRPTSS RNGSTSRKAL LSSSRPSSGE
401: PSDPTRTSHL IPTSSGSSRP STTQRLHQST GLEARSSSLS KTARNIHDDP TLRTFERLTI SADRRK

Best Arabidopsis Sequence Match ( AT4G14340.1 )
(BLAST)

001: MDRNQKMDHV IGGKFKLGRK LGSGSFGELY LGINIQTGEE VAVKLEPVKT RHPQLQYESK IYMFLQGGTG VPHLKWFGVE GEYSCMVIDL LGPSLEDLFN
101: YCKRIFSLKS VLMLADQLIC RVEYMHSRGF LHRDIKPDNF LMGLGRRANQ VYIIDYGLAK KYKDLQTQKH IPYRENKNLT GTARYASVNT HLGIEQSRRD
201: DLESLGYVLM YFLRGSLPWQ GLKAGTKKQK YDKISEKKML TSVETLCKSY PSEFTSYFHY CRSLRFEDKP DYSYLRRLFR DLFIREGYQL DYVFDWTISK
301: YPQIGSSSRP RPTPRPALDP PGPPAERAEK PTVGQDLRGR FTGAIEAFTR RNVSSQGALG DRSRHRSSDD IPSSAKEVHE SRNGSTSKRG VISSTRPGSS
401: AEPSENHSSR LFSSGSRHAT TQRVPQSYES AAAARPGHED AIRNFELLTI GSGKKRK

Arabidopsis Description

CKL11Casein kinase 1-like protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q39050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.