CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017261_P006	Maize	cytosol	91.61	86.94
Os02t0622100-01	Rice	nucleus	83.01	83.37
HORVU6Hr1G058230.6	Barley	cytosol	83.44	83.26
TraesCS6B01G256000.1	Wheat	cytosol	83.44	83.26
TraesCS6D01G210400.1	Wheat	cytosol	83.01	82.83
TraesCS6A01G225600.1	Wheat	cytosol	82.58	82.4
Zm00001d051135_P005	Maize	cytosol	88.17	81.84
KXG26713	Sorghum	cytosol	77.42	79.12
PGSC0003DMT400065568	Potato	cytosol	71.18	72.43
Solyc06g083830.2.1	Tomato	cytosol	70.97	71.9
PGSC0003DMT400051696	Potato	cytosol	70.97	71.9
Solyc09g066440.2.1	Tomato	cytosol	70.97	71.74
Solyc06g008320.2.1	Tomato	cytosol, nucleus	70.32	71.55
PGSC0003DMT400026692	Potato	cytosol	70.54	71.3
VIT_07s0005g03710.t01	Wine grape	cytosol	69.46	70.52
GSMUA_Achr3P04680_001	Banana	cytosol	70.75	70.0
GSMUA_Achr10P...	Banana	cytosol	70.11	69.96
GSMUA_AchrUn_...	Banana	cytosol	69.46	69.61
GSMUA_Achr5P14540_001	Banana	cytosol	70.11	68.92
KXG31326	Sorghum	cytosol	67.53	67.38
KXG38336	Sorghum	cytosol	68.6	66.6
GSMUA_Achr9P13290_001	Banana	cytosol	69.89	65.0
EES01354	Sorghum	cytosol	58.92	58.3
EES20064	Sorghum	cytosol	56.99	55.91
EES00938	Sorghum	cytosol	53.76	53.19
KXG30048	Sorghum	cytosol	47.31	52.51
KXG31490	Sorghum	cytosol	47.31	51.04
EES19200	Sorghum	cytosol	31.61	24.22
EES00121	Sorghum	cytosol	31.18	23.81
OQU79450	Sorghum	nucleus	30.32	23.58
OQU79738	Sorghum	nucleus	31.18	23.5
KXG34480	Sorghum	cytosol	31.18	20.37
EER93310	Sorghum	mitochondrion, plastid	29.68	19.52
OQU87630	Sorghum	plastid	30.75	18.77

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.4.1	EntrezGene:8066158	UniProt:C5XXS5	EnsemblPlants:EES05449	ProteinID:EES05449
ProteinID:EES05449.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0006810	GO:GO:0006897	GO:GO:0006950
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008360	GO:GO:0009409	GO:GO:0009628
GO:GO:0009653	GO:GO:0009719	GO:GO:0009741	GO:GO:0009826	GO:GO:0009850	GO:GO:0009987
GO:GO:0016043	GO:GO:0016049	GO:GO:0016301	GO:GO:0016740	GO:GO:0018105	GO:GO:0019538
GO:GO:0040007	GO:GO:0048364	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR11909	PANTHER:PTHR11909:SF200	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	EnsemblPlantsGene:SORBI_3004G219000	SUPFAM:SSF56112	unigene:Sbi.14153	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A85358
RefSeq:XP_002452473.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:56853187..56859668

Molecular Weight (calculated)

52553.6 Da

IEP (calculated)

10.147

GRAVY (calculated)

-0.622

Length

465 amino acids

Sequence
(BLAST)

001: MEHVVGARFK LGKKIGSGSF GELYLGVNIQ NGEEVAIKLE SVKSRHPQLI YESKIYMFLH GGTGIPNLKY FGVEGDYNVM VIDLLGPSLE DLFNYCNRKF
101: SLKTVLMLAD QMIARVEYMH TRGFLHRDIK PDNFLMGLGC KASQVYVIDY GLAKKYRDLH THRHIPYRED KNLTGTARYA SVNTHLGVEQ SRRDDLESLG
201: YVLMYFLRGS LPWQGLKAGT KKQKYDKISE KKMLTSIEAL CKSYPSEFIT YFHYCRSLRF EDKPDYSYLK KIFRDLFIRE GYQPDYVFDW TVSRQAADNN
301: RLRLSGKTGG LVGPSVDRAE RAAARHDVAE RFTGPADAFT RRTGSGSGHY GEHTKHRTLL DSLMASKMAV DSDKRRHSSS RNGSTSRKAL LSSSRGSGDP
401: SDPNRSSHLV PTTTSSSRPS TNQRLHQSTG LEGRTSSFPK AGRIGHDDPT MRSIGRLTIS AERRK

Best Arabidopsis Sequence Match ( AT4G14340.1 )
(BLAST)

001: MDRNQKMDHV IGGKFKLGRK LGSGSFGELY LGINIQTGEE VAVKLEPVKT RHPQLQYESK IYMFLQGGTG VPHLKWFGVE GEYSCMVIDL LGPSLEDLFN
101: YCKRIFSLKS VLMLADQLIC RVEYMHSRGF LHRDIKPDNF LMGLGRRANQ VYIIDYGLAK KYKDLQTQKH IPYRENKNLT GTARYASVNT HLGIEQSRRD
201: DLESLGYVLM YFLRGSLPWQ GLKAGTKKQK YDKISEKKML TSVETLCKSY PSEFTSYFHY CRSLRFEDKP DYSYLRRLFR DLFIREGYQL DYVFDWTISK
301: YPQIGSSSRP RPTPRPALDP PGPPAERAEK PTVGQDLRGR FTGAIEAFTR RNVSSQGALG DRSRHRSSDD IPSSAKEVHE SRNGSTSKRG VISSTRPGSS
401: AEPSENHSSR LFSSGSRHAT TQRVPQSYES AAAARPGHED AIRNFELLTI GSGKKRK

Arabidopsis Description

CKL11Casein kinase 1-like protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q39050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.