CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0570500-01	Rice	plasma membrane	82.77	82.42
TraesCS3A01G207000.2	Wheat	cytosol	79.36	79.87
EES20064	Sorghum	cytosol	80.21	79.54
HORVU3Hr1G049480.6	Barley	cytosol	78.3	78.13
TraesCS3B01G238800.4	Wheat	cytosol	80.21	77.25
TraesCS3D01G208900.6	Wheat	cytosol	79.15	76.23
EES01354	Sorghum	cytosol	70.0	70.0
AT4G08800.1	Thale cress	cytosol	42.34	69.82
CDX70305	Canola	cytosol	42.34	67.23
AT2G19470.1	Thale cress	cytosol	57.02	61.89
Bra036721.1-P	Field mustard	cytosol	57.23	61.56
KXG31326	Sorghum	cytosol	55.74	56.22
KXG26713	Sorghum	cytosol	52.98	54.73
KXG30048	Sorghum	cytosol	48.09	53.94
EES05449	Sorghum	cytosol	53.19	53.76
KXG38336	Sorghum	cytosol	54.04	53.03
KXG31490	Sorghum	cytosol	47.66	51.97
OQU79738	Sorghum	nucleus	31.7	24.15
OQU79450	Sorghum	nucleus	30.43	23.91
EES00121	Sorghum	cytosol	29.79	22.99
EES19200	Sorghum	cytosol	29.57	22.9
KXG34480	Sorghum	cytosol	31.06	20.51
EER93310	Sorghum	mitochondrion, plastid	28.72	19.09
OQU87630	Sorghum	plastid	30.85	19.03

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.4.1	EntrezGene:8078617	UniProt:C5XNR3	EnsemblPlants:EES00938	ProteinID:EES00938
ProteinID:EES00938.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0006810	GO:GO:0006897	GO:GO:0008150
GO:GO:0008152	GO:GO:0008360	GO:GO:0009653	GO:GO:0009987	GO:GO:0016043	GO:GO:0016301
GO:GO:0016740	GO:GO:0018105	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR11909	PANTHER:PTHR11909:SF162	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3003G193500	SUPFAM:SSF56112	unigene:Sbi.3304	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0001A84883	RefSeq:XP_002455818.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:51616474..51620984

Molecular Weight (calculated)

53460.0 Da

IEP (calculated)

10.240

GRAVY (calculated)

-0.579

Length

470 amino acids

Sequence
(BLAST)

001: MEPRVANKFR LGRKLGSGSF GEIFLGTHVQ TNEQVAIKLE NMKTKHPQLL YEAKLYRILQ GGTGIPNIKW FGVEGDYNVL VMDLLGPSLE ELFSFCNRKL
101: SLKTVLMLAD QLINRIEYVH MKSFLHRDIK PDNFLMGLGK RMNQAYVIDF GLAKKYRDST NQHIPYRENK NLTGTARYAS VNTHLGIEQS RRDDMESLGY
201: VLMYFLRGSL PWQGLKAGTK KQKYEKISER KIATSVEVLC RGYPPEFQRY FHHCRALRFD DAPDYQYLKK MFRDLFIREG FQFDYVFDWT ILKYQQSQMT
301: IPPRAMAAAT DQSSRMASMA NNNGLSATEE GKRSGWSDDP LRRQVPPAGI NAGSLAKQKS PVRQEVSTSK DAVFASSSIL GRSSGSLRRP AVPSSRVPTS
401: EALLRSRTPD GSPGSFQRNA PTHRTSQTHE YLDRSGVSLS GRLMPNTKHY ESTLRSIQGL NVDANDRIHY

Best Arabidopsis Sequence Match ( AT1G72710.1 )
(BLAST)

001: MEPRVGNKFR LGRKIGGGSF GEIYLGTNIQ TNEEVAIKLE NVKTKHPQLL YESKLYKVLQ GGTGVPNVKW YGVEGDYNVL VIDLLGPSLE DLFNFCSRKL
101: SLKTVLMLAD QMINRIEFVH QKSFLHRDIK PDNFLMGLGR RANQVYVIDF GLAKKYRDSN HQHIPYRENK NLTGTARYAS MNTHLGIEQS RRDDLESLGF
201: VLMYFLKGSL PWQGLKAGNK KQKYEKISEK KVSTSIEALC RGYPSEFASY FHYCRSLRFD DKPDYAYLKR LFRDLFIREG FQFDYVFDWT ILKYQQSQIS
301: TPPPRHHGPV VGPSSALPPA ITSAERPSGG DEARPSGWSS GIPRRNSGQI FNSGSLAKQK APVSSDPAIS KDVVLSSSSF LRATGSSRRA AVSSSREAAV
401: LGTDSEPSNP QIVEAGSGSN SKIPVSRNSP IVSSEINKLS SPSRATTSVM KNYEANLKGI ESLHF

Arabidopsis Description

CKL2Casein kinase 1-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAI5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.