Factsheet for VIT_04s0008g00160.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
nucleus 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P26340_001	Banana	cytosol	77.84	89.27
GSMUA_Achr9P06110_001	Banana	cytosol	76.69	87.81
Os01t0744300-01	Rice	cytosol, nucleus, plastid	74.24	86.43
EES19200	Sorghum	cytosol	75.11	86.0
Bra007778.1-P	Field mustard	cytosol	74.1	85.83
Zm00001d037744_P001	Maize	cytosol	74.96	85.83
TraesCS1B01G143100.4	Wheat	cytosol	74.82	85.67
CDX76739	Canola	cytosol	73.96	85.67
Os05t0200500-02	Rice	cytosol	74.68	85.5
GSMUA_Achr2P15650_001	Banana	cytosol	74.39	85.45
GSMUA_AchrUn_...	Banana	cytosol	45.9	85.29
TraesCS1D01G130400.2	Wheat	cytosol	74.24	85.01
CDY11509	Canola	cytosol	68.92	84.78
TraesCS1A01G123900.2	Wheat	cytosol	74.39	84.75
CDY21505	Canola	cytosol	74.96	84.72
EES00121	Sorghum	cytosol	73.38	83.74
VIT_09s0002g03680.t01	Wine grape	cytosol	84.6	83.52
VIT_19s0085g00700.t01	Wine grape	cytosol	14.53	83.47
Zm00001d039409_P004	Maize	cytosol	72.95	82.98
TraesCS3A01G311600.3	Wheat	cytosol	71.37	81.71
Solyc12g095830.1.1	Tomato	nucleus	82.88	81.7
HORVU3Hr1G027270.1	Barley	cytosol	71.22	81.55
Zm00001d008863_P004	Maize	cytosol	59.14	81.55
GSMUA_Achr4P01010_001	Banana	plastid	80.14	81.43
TraesCS3D01G142700.1	Wheat	cytosol	71.22	80.75
TraesCS3B01G160600.1	Wheat	cytosol	71.22	80.75
PGSC0003DMT400047803	Potato	cytosol, mitochondrion, nucleus, plastid	79.42	80.12
PGSC0003DMT400075580	Potato	cytosol	81.3	80.03
Solyc11g070170.1.1	Tomato	cytosol, mitochondrion, nucleus, plastid	79.57	79.91
AT2G25760.2	Thale cress	cytosol	76.98	79.14
Os01t0198200-01	Rice	cytosol, mitochondrion, nucleus, vacuole	71.65	78.3
TraesCS3D01G275000.1	Wheat	cytosol	73.67	76.99
TraesCS3B01G308800.1	Wheat	cytosol	73.53	76.96
TraesCS3A01G275100.1	Wheat	cytosol	73.67	76.65
OQU79450	Sorghum	nucleus	65.76	76.42
HORVU3Hr1G070920.2	Barley	mitochondrion	72.23	75.04
GSMUA_Achr9P00060_001	Banana	cytosol	24.17	74.01
VIT_06s0004g01090.t01	Wine grape	nucleus	75.25	73.25
Zm00001d012761_P002	Maize	cytosol, mitochondrion, nucleus, plastid	69.78	71.64
VIT_08s0007g07420.t01	Wine grape	cytosol	69.78	68.41
GSMUA_AchrUn_...	Banana	cytosol	17.7	66.85
VIT_11s0016g04060.t01	Wine grape	cytosol	65.9	65.43
HORVU1Hr1G028450.16	Barley	cytosol	65.61	63.87
GSMUA_Achr9P00070_001	Banana	extracellular	16.4	51.58
VIT_05s0049g01240.t01	Wine grape	cytosol	23.02	34.48
VIT_09s0002g01740.t01	Wine grape	cytosol	22.88	33.76
VIT_07s0005g03710.t01	Wine grape	cytosol	22.01	33.41
VIT_11s0016g01950.t01	Wine grape	cytosol	22.59	33.12
VIT_11s0016g03460.t01	Wine grape	cytosol	19.14	30.72

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100254265	wikigene:100254265	MapMan:12.3.6.2	MapMan:18.4.4.2	ProteinID:CCB46514
ProteinID:CCB46514.1	UniProt:F6H358	EMBL:FN595231	GO:GO:0000166	GO:GO:0001934	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0008360	GO:GO:0009653	GO:GO:0009987	GO:GO:0016043
GO:GO:0016301	GO:GO:0016740	GO:GO:0018105	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100254265	wikigene:LOC100254265	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR11909	PANTHER:PTHR11909:SF73	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI00015C8448	ArrayExpress:VIT_04s0008g00160	EnsemblPlantsGene:VIT_04s0008g00160	EnsemblPlants:VIT_04s0008g00160.t01	RefSeq:XP_002272679
RefSeq:XP_002272679.2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4:+:69576..78197

Molecular Weight (calculated)

77992.5 Da

IEP (calculated)

8.916

GRAVY (calculated)

-0.554

Length

695 amino acids

Sequence
(BLAST)

001: MPELRSGVRR GRAHRNPNAI RIEDQSVTAV RTRPRRAAQN RRGEVVVDGG ERDILRGLGL QATSFEEEEV KVLGATGGGS GPPREEVAEK EMDEYDSGGR
101: SGDKGPGAED EGSTAPLPEK VQVGGSPVYK IDRKLGKGGF GQVYVGRRIG GNSNERTGAG AVEVALKFEH RSSKGCNYGP PYEWQVYNAL GGSHGVPRVH
201: YKGRQGDYYV MVMDMLGPSL WDVWNNNSHT MSIEMVACIA IEAISILEKM HSRGYVHGDV KPENFLLGPP GTNEEKKLFL VDLGLATKWR DSSTGLHVEY
301: DQRPDVFRGT VRYASVHAHL GRTGSRRDDL ESLAYTLIFL LRGRLPWQGY QGENKGYLVC KKKMATSPEA LCCFCPQPFR QFVEYVVNLK FDEEPNYAKY
401: ISLFDGIVGP NPDIRPINTD GAQKLIYQVG HKRGRLTMEE DDDEQPKKKV RMGMPATQWI SVYNARRPMK QRYHYNVADV RLPQHVEKGN EDGLYISSVA
501: SCSNLWALIM DAGTGFSAQV YELSPYFLHK EWIMEQWEKN YYISAIAGAN NGSSLVVMSK GTQYLQQSYK VSESFPFKWI NKKWREGFYV TAMATAGSRW
601: AIVMSRGAGF SDQVVELDFL YPSEGIHRRW DNGYRITATA ATWDQAAFVL SVPRRKPADE TQETLRTSAF PSTHVKEKWA KNLYIASVCY GRTVS

Best Arabidopsis Sequence Match ( AT2G25760.1 )
(BLAST)

001: MPELRSNARR DRDKKNPKQN PIALKQSPVR RNPRRQLKKK VVVKEAIVAA EKTTPLVKEE EEQIRVSSED KKMDENDSGG QAAPVPDDEG NAPPLPEKVQ
101: VGNSPMYKLD RKLGKGGFGQ VYVGRKMGTS TSNARFGPGA LEVALKFEHR TSKGCNYGPP YEWQVYNALG GSHGVPRVHF KGRQGDFYVM VMDILGPSLW
201: DVWNSTTQAM STEMVACIAI EAISILEKMH SRGYVHGDVK PENFLLGPPG TPEEKKLFLV DLGLASKWRD TATGLHVEYD QRPDVFRGTV RYASVHAHLG
301: RTCSRRDDLE SLAYTLVFLL RGRLPWQGYQ GENKGFLVCK KKMATSPETL CCFCPQPFRQ FVEYVVNLKF DEEPDYAKYV SLFDGIVGPN PDIRPINTEG
401: AQKLIHQVGQ KRGRLTMDEE DEQPTKKIRL GMPATQWISI YSAHRPMKQR YHYNVTDTRL AQHIEKGNED GLFISSVASC TDLWALIMDA GSGFTDQVYQ
501: LSPSFLHKEW IMEQWEKNYY ITAVAGANSG NSFVVMSKGT QYLQQSYKVS DSFPFKWINK KWREGFYVTS MATAGSKWGI VMSRGASFSD QVIELDFLYP
601: SEGIHRRWEN GYRITSVAAT WDQAAFVLSV PRRKLTDETQ ETLRTSAFPS NHVKEKWGKN LYIASICYGR TVS

Arabidopsis Description

Protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4ISN5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.