CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
mitochondrion 5
nucleus 1
cytosol 2

Predictors

GFP

MS/MS

Papers

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47219	Soybean	nucleus	96.48	94.88
KRH52778	Soybean	nucleus	74.12	86.96
VIT_19s0085g00700.t01	Wine grape	cytosol	14.35	84.3
GSMUA_Achr6P26340_001	Banana	cytosol	71.45	83.83
Os01t0744300-01	Rice	cytosol, nucleus, plastid	69.06	82.24
GSMUA_Achr9P06110_001	Banana	cytosol	70.18	82.21
EES19200	Sorghum	cytosol	68.92	80.72
TraesCS1B01G143100.4	Wheat	cytosol	68.78	80.56
Zm00001d037744_P001	Maize	cytosol	68.64	80.4
Os05t0200500-02	Rice	cytosol	68.5	80.23
GSMUA_Achr2P15650_001	Banana	cytosol	68.21	80.17
TraesCS1D01G130400.2	Wheat	cytosol	68.35	80.07
TraesCS1A01G123900.2	Wheat	cytosol	68.35	79.67
EES00121	Sorghum	cytosol	68.21	79.64
Zm00001d039409_P004	Maize	cytosol	67.51	78.56
KRH62090	Soybean	cytosol	74.4	78.49
Zm00001d008863_P004	Maize	cytosol	55.56	78.37
GSMUA_AchrUn_...	Banana	cytosol	40.65	77.27
GSMUA_Achr4P01010_001	Banana	plastid	74.12	77.05
TraesCS3A01G311600.3	Wheat	cytosol	65.68	76.94
HORVU3Hr1G027270.1	Barley	cytosol	65.54	76.77
TraesCS3D01G142700.1	Wheat	cytosol	65.68	76.18
TraesCS3B01G160600.1	Wheat	cytosol	65.68	76.18
KRH62093	Soybean	nucleus	75.81	75.92
OQU79450	Sorghum	nucleus	63.15	75.08
Os01t0198200-01	Rice	cytosol, mitochondrion, nucleus, vacuole	66.81	74.69
KRH01814	Soybean	nucleus	70.04	74.11
KRH46874	Soybean	nucleus	69.76	73.81
TraesCS3A01G275100.1	Wheat	cytosol	69.06	73.5
TraesCS3B01G308800.1	Wheat	cytosol	68.64	73.49
TraesCS3D01G275000.1	Wheat	cytosol	68.5	73.23
HORVU3Hr1G070920.2	Barley	mitochondrion	67.93	72.2
KRG93028	Soybean	cytosol	67.23	71.45
KRH36274	Soybean	nucleus	67.09	70.98
Zm00001d012761_P002	Maize	cytosol, mitochondrion, nucleus, plastid	67.23	70.61
GSMUA_Achr9P00060_001	Banana	cytosol	21.8	68.28
KRH06716	Soybean	nucleus	66.24	66.43
Solyc08g066400.1.1	Tomato	cytosol	30.94	66.07
GSMUA_AchrUn_...	Banana	cytosol	16.74	64.67
Solyc08g066410.1.1	Tomato	cytosol	29.54	60.87
HORVU1Hr1G028450.16	Barley	cytosol	61.04	60.78
GSMUA_Achr9P00070_001	Banana	extracellular	15.89	51.13
KRH12426	Soybean	cytosol	13.78	40.83
KRH12421	Soybean	cytosol	9.56	40.72
KRH34398	Soybean	nucleus	22.08	34.73
KRG92405	Soybean	cytosol	22.22	34.65
KRH19210	Soybean	nucleus	20.96	32.82
KRG95693	Soybean	cytosol	21.52	32.76
KRH67417	Soybean	nucleus	21.52	32.69
KRH02686	Soybean	nucleus	20.82	32.6
KRH19588	Soybean	cytosol, nucleus	20.68	32.45
KRH32213	Soybean	cytosol	20.53	32.3
KRH37421	Soybean	nucleus	20.11	31.36
KRH23272	Soybean	cytosol	20.82	31.36
KRH10045	Soybean	nucleus	20.68	31.21
KRH44105	Soybean	cytosol	20.68	30.88
KRH39332	Soybean	cytosol	18.14	30.28
KRH60238	Soybean	cytosol	18.28	30.23
KRH41527	Soybean	nucleus	18.14	30.0
KRH76321	Soybean	cytosol	17.86	29.4
KRH04915	Soybean	cytosol	17.44	29.18
KRH62054	Soybean	cytosol	17.16	28.57
KRH52721	Soybean	cytosol	17.16	28.5
KRH47076	Soybean	cytosol	15.05	28.38
KRH66363	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole	9.56	26.67
KRH12422	Soybean	cytosol, nucleus	9.99	24.65

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100799630	MapMan:12.3.6.2	MapMan:18.4.4.2	EMBL:ACUP02004925	EnsemblPlantsGene:GLYMA_08G201600
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0008360	GO:GO:0009653
GO:GO:0009987	GO:GO:0016043	GO:GO:0016301	GO:GO:0016740	GO:GO:0018105	GO:GO:0019538
UniProt:I1KV29	InterPro:IPR000719	EnsemblPlants:KRH44285	ProteinID:KRH44285	ProteinID:KRH44285.1	InterPro:Kinase-like_dom_sf
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR11909	PANTHER:PTHR11909:SF73
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002338C93
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:16333104..16339017

Molecular Weight (calculated)

79350.9 Da

IEP (calculated)

9.157

GRAVY (calculated)

-0.566

Length

711 amino acids

Sequence
(BLAST)

001: MPVLRSGARK GRAAPKQQQQ KQQQSPVVEG EAIATRTRRR RAAAAAAAAV PESNNNNNNT NNQQQQVEQV AVVNENVAVA AREEDNRVAE EEGVVRGGGA
101: EREEVAEKKM GGCDSGGRSN GKANAAGEDD ANTPQVPQKI QVGNSPSYKV EKKLGKGGFG QVYVGRRTGG NLNERTGPGA VEVALKLEHR TSKGCTYGPP
201: YEWQVYNTLG GSHGVPQVHY KGRQGDYYVM VMDMLGPSLW DVWNNSNHHM TTEMVACIAI EAISILEKMH SRGYVHGDVK PENFLLGAPG TPDEKKLFLV
301: DLGLATKWRD STTGSHVEYD QRPDVFRGTV RYASVHAHLG RTASRRDDLE SLAYTLIFLL RGRLPWQGFQ GENKGFLVCK KKMGTSPETL CCFSPLPFKQ
401: FVEHVVNLKF DEEPNYAKYI SLFDGVVGPN PDIRPINTEG AQKLIGHKRG RLVMEEEDDE QPKKKIRIGL PASQWISVYN ARRPMKQRYH YNVSDTRLSQ
501: HIEKGNEDGL YISSVASCQN LWALIMDAGT GFTAQVYELS PFFLHKEWIM EHWEKNYYIS AIAGAVNGSS LVVMSKGTQY LQQSYKVSDS FPFKWINKKW
601: REGFYVTAMA TSGSRWGVVM SRGAGFSDQV VELDFLYPSE GIHKRWDCGY RITATAATWD QAAFVLSVPR RKPLDETQET LRTSAFPSTH VKEKWAKNLY
701: IASICYGRTV S

Best Arabidopsis Sequence Match ( AT2G25760.1 )
(BLAST)

001: MPELRSNARR DRDKKNPKQN PIALKQSPVR RNPRRQLKKK VVVKEAIVAA EKTTPLVKEE EEQIRVSSED KKMDENDSGG QAAPVPDDEG NAPPLPEKVQ
101: VGNSPMYKLD RKLGKGGFGQ VYVGRKMGTS TSNARFGPGA LEVALKFEHR TSKGCNYGPP YEWQVYNALG GSHGVPRVHF KGRQGDFYVM VMDILGPSLW
201: DVWNSTTQAM STEMVACIAI EAISILEKMH SRGYVHGDVK PENFLLGPPG TPEEKKLFLV DLGLASKWRD TATGLHVEYD QRPDVFRGTV RYASVHAHLG
301: RTCSRRDDLE SLAYTLVFLL RGRLPWQGYQ GENKGFLVCK KKMATSPETL CCFCPQPFRQ FVEYVVNLKF DEEPDYAKYV SLFDGIVGPN PDIRPINTEG
401: AQKLIHQVGQ KRGRLTMDEE DEQPTKKIRL GMPATQWISI YSAHRPMKQR YHYNVTDTRL AQHIEKGNED GLFISSVASC TDLWALIMDA GSGFTDQVYQ
501: LSPSFLHKEW IMEQWEKNYY ITAVAGANSG NSFVVMSKGT QYLQQSYKVS DSFPFKWINK KWREGFYVTS MATAGSKWGI VMSRGASFSD QVIELDFLYP
601: SEGIHRRWEN GYRITSVAAT WDQAAFVLSV PRRKLTDETQ ETLRTSAFPS NHVKEKWGKN LYIASICYGR TVS

Arabidopsis Description

Protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4ISN5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.