Factsheet for Bra024179.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

nucleus 3
plastid 4
cytosol 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY50929	Canola	cytosol	93.93	95.49
AT4G28880.1	Thale cress	cytosol	86.68	89.4
Bra011067.1-P	Field mustard	cytosol	81.54	83.69
Solyc12g007280.1.1	Tomato	cytosol	63.55	72.53
KRH41527	Soybean	nucleus	70.33	70.0
KRH39332	Soybean	cytosol	69.63	69.95
KRH60238	Soybean	cytosol	69.86	69.53
VIT_11s0016g03460.t01	Wine grape	cytosol	70.33	69.52
KRH76321	Soybean	cytosol	70.09	69.44
PGSC0003DMT400001003	Potato	cytosol	66.59	67.38
GSMUA_Achr7P14470_001	Banana	cytosol	66.59	65.82
GSMUA_Achr2P19240_001	Banana	cytosol	66.36	65.44
TraesCS6B01G218400.1	Wheat	cytosol	59.35	62.87
TraesCS3D01G162900.1	Wheat	cytosol	58.88	62.38
TraesCS3B01G181900.3	Wheat	cytosol	58.88	62.38
TraesCS6D01G174800.2	Wheat	cytosol	59.58	62.2
TraesCS3A01G155400.4	Wheat	cytosol	58.41	61.88
TraesCS6A01G196400.2	Wheat	cytosol	59.11	61.71
GSMUA_Achr8P19730_001	Banana	cytosol	42.52	61.07
Os02t0280400-02	Rice	cytosol	59.11	60.82
HORVU0Hr1G016190.11	Barley	cytosol	55.37	60.46
Os01t0231500-01	Rice	cytosol	60.28	60.0
KXG30048	Sorghum	cytosol	57.94	59.19
Bra035646.1-P	Field mustard	cytosol	49.77	59.17
Zm00001d039296_P005	Maize	cytosol	56.78	59.12
Zm00001d053316_P013	Maize	cytosol	57.71	57.98
KXG31490	Sorghum	cytosol	57.01	56.61
HORVU3Hr1G031560.1	Barley	cytosol, plastid	58.88	52.94
Bra006839.1-P	Field mustard	cytosol	53.04	52.79
Bra002771.1-P	Field mustard	cytosol	52.57	51.96
Bra023732.1-P	Field mustard	cytosol	50.7	50.12
Bra016039.1-P	Field mustard	cytosol	52.8	48.6
Bra036721.1-P	Field mustard	cytosol	49.3	48.28
Bra013949.1-P	Field mustard	cytosol	51.64	48.04
Bra008043.1-P	Field mustard	cytosol	51.87	47.74
Bra032536.1-P	Field mustard	cytosol	50.47	47.47
Bra010762.1-P	Field mustard	cytosol	49.53	46.9
Bra010361.1-P	Field mustard	cytosol	51.87	46.44
Bra027528.1-P	Field mustard	cytosol	51.64	46.23
Bra011038.1-P	Field mustard	cytosol	51.87	46.15
Bra035974.1-P	Field mustard	cytosol	50.23	45.26
Bra027483.1-P	Field mustard	cytosol	50.93	45.23
Bra032511.1-P	Field mustard	cytosol	49.07	44.97
Bra015317.1-P	Field mustard	cytosol	47.66	44.54
Bra024191.1-P	Field mustard	cytosol	19.39	27.39
Bra007778.1-P	Field mustard	cytosol	29.44	21.0
Bra021498.1-P	Field mustard	cytosol	29.44	18.45
Bra027409.1-P	Field mustard	cytosol, plastid	29.44	18.29
Bra001518.1-P	Field mustard	cytosol	28.97	18.16
Bra006445.1-P	Field mustard	cytosol	28.5	17.97
Bra002140.1-P	Field mustard	cytosol	28.74	17.8
Bra036426.1-P	Field mustard	cytosol	29.21	17.76
Bra023667.1-P	Field mustard	cytosol	28.27	17.69
Bra031961.1-P	Field mustard	cytosol	28.97	15.46
Bra013948.1-P	Field mustard	cytosol	1.87	1.84

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.4.1	EnsemblPlantsGene:Bra024179	EnsemblPlants:Bra024179.1	EnsemblPlants:Bra024179.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009628	GO:GO:0009637	GO:GO:0009640	GO:GO:0009785	GO:GO:0009791	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M4E5X5
PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR11909	PANTHER:PTHR11909:SF97	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002540C43	SEG:seg	:

Description

AT4G28880 (E=3e-214) ckl3 | ckl3 (Casein Kinase I-like 3); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase

Coordinates

chrA03:+:27096384..27102111

Molecular Weight (calculated)

48026.9 Da

IEP (calculated)

9.987

GRAVY (calculated)

-0.706

Length

428 amino acids

Sequence
(BLAST)

001: MGGSSSSSPT SSSPAKRGKN KNGSDKPKQP QRATHVDSFE IVAVKIENSK TKHPQLLYEA KLYRVLEGGS GIPRIKWFGV DGTENALVMD LLGPSLEDLF
101: VYCGRKFSPK TVLLLADQML TRIEYVHSKG YLHRDIKPDN FLMGLGRKAN QVYLIDFGLA KRYRDANTNR HIPYRENKNL TGTARYASCN THLGIEQSRR
201: DDLESLGYVL LYFLRGSLPW QGLKAIDKKQ KYDKICEKKI STPIEVLCKG HPVEFASYFH YCHTLTFDQR PDYGFLKRLF RDLFSREGYE MDYIFDWTII
301: KYQQAQKTRN QSQAVPGSSN TRATPMDTSN HRGGPNIPYE ADVSERVRSG KAIGPSPQIN NNPATGRTLG FDQPVHKNVN MPSTSLSPAG TSKRNVGQSG
401: FPPETSNAGY ESGKRTGGWT SSFMSPDK

Best Arabidopsis Sequence Match ( AT4G28880.3 )
(BLAST)

001: MERIIGGKYK LGRKIGGGSF GEIFLATHVD TFEIVAVKIE NSKTKHPQLL YEAKLYRILE GGSGIPRIKW FGVDGTENAL VMDLLGPSLE DLFVYCGRKF
101: SPKTVLMLAD QMLTRIEFVH SKGYLHRDIK PDNFLMGLGR KANQVYLIDF GLAKRYRDAN TNRHIPYREN KNLTGTARYA SCNTHLGIEQ SRRDDLESLG
201: YVLLYFLRGS LPWQGLKAVD KKQKYDKICE KKISTPIEVL CKNHPVEFAS YFHYCHTLTF DQRPDYGFLK RLFRDLFSRE GYEFDYIFDW TIIKYQQAQK
301: SRNQSQAVPG SSNPRAMPVD TSNHRGGPNI SYEAEASERV RSANAIGPSP QINNNTAAGR TPGFDHPVHK NMNMPSTSLS PAGTSKRNVG PETSNSGYGS
401: GNRTGWTSSF MSPEK

Arabidopsis Description

CKL3Ckl3 [Source:UniProtKB/TrEMBL;Acc:A0A178UXY3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.