Factsheet for Bra016039.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra034367.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G72710.1	Bra034367.1-P	AT2G27770.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96430	Canola	cytosol	100.0	100.0
CDX72938	Canola	cytosol	99.57	97.89
AT1G72710.1	Thale cress	cytosol	92.47	92.47
Bra008043.1-P	Field mustard	cytosol	92.26	92.26
KRH12426	Soybean	cytosol	42.15	81.67
Bra035646.1-P	Field mustard	cytosol	61.51	79.44
VIT_09s0002g01740.t01	Wine grape	cytosol	78.92	77.92
VIT_11s0016g01950.t01	Wine grape	cytosol	78.49	77.0
Solyc05g016410.2.1	Tomato	cytosol, nucleus	77.63	76.97
PGSC0003DMT400082747	Potato	cytosol	78.06	76.91
Solyc03g121820.2.1	Tomato	cytosol, nucleus	77.63	76.81
Solyc07g040720.2.1	Tomato	nucleus	77.85	76.69
Solyc06g062790.2.1	Tomato	cytosol, nucleus	76.56	76.23
PGSC0003DMT400012385	Potato	cytosol	76.34	76.02
PGSC0003DMT400006625	Potato	cytosol	76.99	76.01
GSMUA_Achr4P09160_001	Banana	cytosol	76.77	75.96
GSMUA_Achr4P08690_001	Banana	cytosol	76.99	75.69
EES01354	Sorghum	cytosol	75.48	74.68
HORVU3Hr1G066800.6	Barley	cytosol	75.48	74.05
Bra006839.1-P	Field mustard	cytosol	68.39	73.95
GSMUA_AchrUn_...	Banana	cytosol	75.05	73.78
TraesCS3B01G281100.2	Wheat	cytosol	74.84	73.57
TraesCS3D01G252000.2	Wheat	cytosol	74.84	73.57
TraesCS3A01G251600.2	Wheat	cytosol	74.62	73.36
Bra002771.1-P	Field mustard	cytosol	67.96	72.98
Bra013949.1-P	Field mustard	cytosol	71.83	72.61
GSMUA_Achr7P24210_001	Banana	cytosol	74.62	72.29
GSMUA_Achr6P35790_001	Banana	cytosol	72.9	71.52
GSMUA_Achr5P09640_001	Banana	cytosol	71.18	70.28
GSMUA_Achr8P24940_001	Banana	cytosol	73.33	69.17
Bra036721.1-P	Field mustard	cytosol	64.3	68.42
Zm00001d011696_P002	Maize	cytosol	64.95	68.17
Zm00001d043693_P002	Maize	cytosol	63.66	63.79
Bra023732.1-P	Field mustard	cytosol	56.34	60.51
Bra032536.1-P	Field mustard	cytosol	59.14	60.44
Bra027528.1-P	Field mustard	cytosol	60.0	58.37
Bra010762.1-P	Field mustard	cytosol	55.91	57.52
Bra035974.1-P	Field mustard	cytosol	58.28	57.05
Bra011038.1-P	Field mustard	cytosol	58.92	56.96
Bra027483.1-P	Field mustard	cytosol	58.28	56.22
Bra010361.1-P	Field mustard	cytosol	57.63	56.07
Bra011067.1-P	Field mustard	cytosol	49.89	55.64
Bra015317.1-P	Field mustard	cytosol	53.98	54.8
Bra032511.1-P	Field mustard	cytosol	54.62	54.39
Bra024179.1-P	Field mustard	cytosol, plastid	48.6	52.8
GSMUA_Achr3P32300_001	Banana	endoplasmic reticulum, plasma membrane	43.44	52.2
Bra024191.1-P	Field mustard	cytosol	27.74	42.57
Bra007778.1-P	Field mustard	cytosol	30.97	24.0
Bra006445.1-P	Field mustard	cytosol	31.83	21.8
Bra023667.1-P	Field mustard	cytosol	31.61	21.49
Bra002140.1-P	Field mustard	cytosol	31.83	21.42
Bra001518.1-P	Field mustard	cytosol	30.32	20.64
Bra021498.1-P	Field mustard	cytosol	30.32	20.64
Bra027409.1-P	Field mustard	cytosol, plastid	30.32	20.46
Bra036426.1-P	Field mustard	cytosol	30.97	20.45
Bra031961.1-P	Field mustard	cytosol	30.54	17.71
Bra013948.1-P	Field mustard	cytosol	4.3	4.61

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.4.1	EnsemblPlantsGene:Bra016039	EnsemblPlants:Bra016039.1	EnsemblPlants:Bra016039.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M4DHR2	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR11909	PANTHER:PTHR11909:SF298	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002541C4A	:

Description

AT1G72710 (E=6e-250) CKL2 | CKL2 (CASEIN KINASE 1-LIKE PROTEIN 2); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase

Coordinates

chrA07:+:19724329..19728075

Molecular Weight (calculated)

51885.5 Da

IEP (calculated)

10.100

GRAVY (calculated)

-0.577

Length

465 amino acids

Sequence
(BLAST)

001: MEPRVGNKFR LGRKIGSGSF GEIYLGTNIQ TNEEVAIKLE NVKTKHPQLL YESKLYKVLQ GGTGVPNVKW YGTEGDYNVL VIDLLGPSLE DLFNFCSRKL
101: SLKTVLMLAD QMINRIEFVH QKSFLHRDIK PDNFLMGLGR RANQVYVIDF GLAKKYRDSN NQHIPYRENK NLTGTARYAS MNTHLGIEQS RRDDLESLGF
201: VLMYFLKGSL PWQGLKAGNK KQKYERISEK KVSTSIESLC RGYPSEFASY FHYCRSLRFD DKPDYAYLKR LFRDLFIREG FQFDYVFDWT ILKYQQSQIS
301: TPPPRPHGAG VGPSSGLPPA IASAERPSGG EEVRPSGWLL GNPRRSSGHI FNSGSSAKQK APVSSDPAIS KDVVLSSSSF LRATGSSRRA TVSSSREPAV
401: PGTDSEPSKP QNIEAGSSSN PKIHGGRSSP IVSSDNNKLS SPSRGNTSVM KNYESNLKGI ESLHF

Best Arabidopsis Sequence Match ( AT1G72710.1 )
(BLAST)

001: MEPRVGNKFR LGRKIGGGSF GEIYLGTNIQ TNEEVAIKLE NVKTKHPQLL YESKLYKVLQ GGTGVPNVKW YGVEGDYNVL VIDLLGPSLE DLFNFCSRKL
101: SLKTVLMLAD QMINRIEFVH QKSFLHRDIK PDNFLMGLGR RANQVYVIDF GLAKKYRDSN HQHIPYRENK NLTGTARYAS MNTHLGIEQS RRDDLESLGF
201: VLMYFLKGSL PWQGLKAGNK KQKYEKISEK KVSTSIEALC RGYPSEFASY FHYCRSLRFD DKPDYAYLKR LFRDLFIREG FQFDYVFDWT ILKYQQSQIS
301: TPPPRHHGPV VGPSSALPPA ITSAERPSGG DEARPSGWSS GIPRRNSGQI FNSGSLAKQK APVSSDPAIS KDVVLSSSSF LRATGSSRRA AVSSSREAAV
401: LGTDSEPSNP QIVEAGSGSN SKIPVSRNSP IVSSEINKLS SPSRATTSVM KNYEANLKGI ESLHF

Arabidopsis Description

CKL2Casein kinase 1-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAI5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.