Factsheet for Bra015317.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89823	Canola	cytosol	99.56	98.28
Bra032511.1-P	Field mustard	cytosol	88.86	87.15
AT1G04440.1	Thale cress	cytosol	86.24	84.4
Bra027483.1-P	Field mustard	cytosol	82.75	78.63
Bra035974.1-P	Field mustard	cytosol	81.44	78.53
Bra023732.1-P	Field mustard	cytosol	68.34	72.29
Solyc09g090230.1.1	Tomato	cytosol, nucleus	17.69	69.83
Bra010762.1-P	Field mustard	cytosol	67.47	68.36
Os02t0810400-01	Rice	cytosol	68.78	68.18
KXG31326	Sorghum	cytosol	68.78	67.6
Zm00001d018440_P002	Maize	cytosol	69.0	67.52
Zm00001d051951_P002	Maize	cytosol	68.12	66.67
TraesCS6D01G362500.1	Wheat	cytosol	68.56	66.38
TraesCS6A01G378000.1	Wheat	cytosol	68.56	66.38
TraesCS6B01G415700.2	Wheat	cytosol	68.56	65.69
Bra032536.1-P	Field mustard	cytosol	64.41	64.84
Bra027528.1-P	Field mustard	cytosol	67.03	64.23
Bra010361.1-P	Field mustard	cytosol	66.81	64.02
Bra011038.1-P	Field mustard	cytosol	66.16	62.99
Bra035646.1-P	Field mustard	cytosol	49.34	62.78
Solyc09g090240.1.1	Tomato	cytosol	24.02	56.41
Bra002771.1-P	Field mustard	cytosol	53.28	56.35
Bra006839.1-P	Field mustard	cytosol	52.84	56.28
Bra013949.1-P	Field mustard	cytosol	54.8	54.57
Bra016039.1-P	Field mustard	cytosol	54.8	53.98
Bra008043.1-P	Field mustard	cytosol	54.8	53.98
Bra036721.1-P	Field mustard	cytosol	50.66	53.09
Bra011067.1-P	Field mustard	cytosol	46.94	51.56
Bra024191.1-P	Field mustard	cytosol	34.06	51.49
Bra024179.1-P	Field mustard	cytosol, plastid	44.54	47.66
Bra007778.1-P	Field mustard	cytosol	31.44	24.0
Bra006445.1-P	Field mustard	cytosol	30.57	20.62
Bra021498.1-P	Field mustard	cytosol	30.57	20.5
Bra023667.1-P	Field mustard	cytosol	30.57	20.47
Bra002140.1-P	Field mustard	cytosol	30.79	20.41
Bra001518.1-P	Field mustard	cytosol	30.13	20.2
Bra027409.1-P	Field mustard	cytosol, plastid	30.35	20.17
Bra036426.1-P	Field mustard	cytosol	30.13	19.6
Bra031961.1-P	Field mustard	cytosol	29.69	16.96
Bra013948.1-P	Field mustard	cytosol	2.62	2.76
Os02t0810500-01	Rice	cytosol, plasma membrane	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.4.1	EnsemblPlantsGene:Bra015317	EnsemblPlants:Bra015317.1	EnsemblPlants:Bra015317.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M4DFP4	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR11909	PANTHER:PTHR11909:SF178	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002543EA9	SEG:seg

Description

AT1G04440 (E=8e-220) CKL13 | CKL13 (CASEIN KINASE LIKE 13); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase

Coordinates

chrA10:-:2505919..2508738

Molecular Weight (calculated)

51947.8 Da

IEP (calculated)

10.339

GRAVY (calculated)

-0.618

Length

458 amino acids

Sequence
(BLAST)

001: MDRVVGGKFK LGRKLGSGSF GEIFLGVNVQ SGDEVAVKLE PLRSRHPQLH YESKIYMFLQ GGSGIPHLKW FGVEGEYNCM VIDLLGPSLE EFFNYCSRSF
101: SLKTVLMLAD QMLNRVEYMH IRGFLHRDIK PDNFLMGVGR RANQVYIIDY GLAKKYRDLQ THKHIPYREN KNLTGTARYA SVNTHLGIEQ SRRDDLESLG
201: YMLILPWQGL RAGTKKEKYD RISEKKRLTP VEVLCKSFPP EFTSYFLYVR SLRFEDKPDY SYLKRLFRDL FIREGYQFDY VFDWTILKYP QFGSSSSSSS
301: SSKPRPGLRP ALNIPAPSAE KPEKPSTGKE TRDRYSSVFE AYTRRTGLGT GLQADRSSRP RTSENVLASR DALNQERSMT SSRNQSSSRK AVAGSSVRAT
401: SSADFAENRT SSRLVPSNGR SSTTQRTQFA PSSSKAAPSR IPPDVTLEFL SIGNGKRK

Best Arabidopsis Sequence Match ( AT1G04440.1 )
(BLAST)

001: MDRVVGGKFK LGRKLGSGSF GEIFLGVNVQ TGEEVAVKLE PLRARHPQLH YESKLYMLLQ GGTGIPHLKW FGVEGEFNCM VIDLLGPSME EFFNYCSRSF
101: SLKTVLMLAD QMINRVEYMH VKGFLHRDIK PDNFLMGLGR KANQVYIIDY GLAKKYRDLQ THKHIPYREN KNLTGTARYA SVNTHLGIEQ SRRDDLESLG
201: YLLMYFLRGS LPWQGLRAGT KKQKYDKISE KKRLTPVEVL CKNFPPEFTS YFLYVRSLRF EDKPDYSYLK RLFRDLFIRE GYQFDYVFDW TILRYPQFGS
301: SSSSNSKPRP TLRPAMNIPV PSADKAEKPP IGQDSRERFS GVFEAYTRRN GSGTGVQADQ SSRPRTSENV LASKDTQNQE RPNSLSRNLS SSRKAIAGSS
401: VRATSSADFT ENRLSRLIPN NDRSSTTLRT QFAPSSSSVA TKAAPTRAAR DITLQSLELL SIGNSKRK

Arabidopsis Description

CKL13Casein kinase 1-like protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.