Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY10056 | Canola | cytosol | 35.04 | 93.71 |
Bra032511.1-P | Field mustard | cytosol | 88.03 | 88.22 |
CDY53188 | Canola | cytosol | 87.61 | 87.79 |
CDY69732 | Canola | cytosol | 86.97 | 87.53 |
CDX89823 | Canola | cytosol | 85.9 | 86.64 |
Bra015317.1-P | Field mustard | cytosol | 84.4 | 86.24 |
CDY18233 | Canola | cytosol | 85.9 | 85.17 |
AT5G43320.1 | Thale cress | cytosol | 86.54 | 84.38 |
Solyc09g090230.1.1 | Tomato | cytosol, nucleus | 18.16 | 73.28 |
AT3G23340.1 | Thale cress | cytosol | 69.02 | 73.08 |
KXG31326 | Sorghum | cytosol | 70.94 | 71.24 |
Os02t0810400-01 | Rice | cytosol | 70.09 | 71.0 |
Zm00001d018440_P002 | Maize | cytosol | 70.94 | 70.94 |
Zm00001d051951_P002 | Maize | cytosol | 70.3 | 70.3 |
TraesCS6A01G378000.1 | Wheat | cytosol | 70.51 | 69.77 |
TraesCS6D01G362500.1 | Wheat | cytosol | 70.51 | 69.77 |
TraesCS6B01G415700.2 | Wheat | cytosol | 70.51 | 69.04 |
AT4G14340.1 | Thale cress | cytosol | 67.31 | 68.93 |
AT1G03930.1 | Thale cress | cytosol | 67.52 | 67.09 |
AT5G44100.1 | Thale cress | cytosol | 67.31 | 66.18 |
AT4G08800.1 | Thale cress | cytosol | 40.17 | 65.96 |
AT4G28540.1 | Thale cress | cytosol | 66.24 | 64.72 |
Solyc09g090240.1.1 | Tomato | cytosol | 24.15 | 57.95 |
AT2G19470.1 | Thale cress | cytosol | 52.78 | 57.04 |
AT5G57015.1 | Thale cress | cytosol | 52.78 | 56.78 |
AT1G72710.1 | Thale cress | cytosol | 55.77 | 56.13 |
AT4G28880.1 | Thale cress | cytosol | 49.57 | 55.9 |
AT4G26100.1 | Thale cress | cytosol | 53.21 | 55.33 |
AT4G28860.1 | Thale cress | cytosol | 48.72 | 55.07 |
AT2G25760.2 | Thale cress | cytosol | 31.84 | 22.04 |
AT5G18190.2 | Thale cress | cytosol | 30.77 | 20.84 |
AT3G03940.1 | Thale cress | cytosol, plastid | 30.34 | 20.26 |
AT3G13670.1 | Thale cress | cytosol | 29.27 | 19.49 |
AT3G03930.1 | Thale cress | nucleus | 7.91 | 12.89 |
Os02t0810500-01 | Rice | cytosol, plasma membrane | 0.0 | 0.0 |
Protein Annotations
Gene3D:1.10.510.10 | MapMan:18.4.4.1 | EntrezGene:839520 | UniProt:A0A178WNS3 | ProteinID:AAB70431.1 | ProteinID:AEE27698.1 |
ArrayExpress:AT1G04440 | EnsemblPlantsGene:AT1G04440 | RefSeq:AT1G04440 | TAIR:AT1G04440 | RefSeq:AT1G04440-TAIR-G | EnsemblPlants:AT1G04440.1 |
TAIR:AT1G04440.1 | EMBL:AY943851 | EMBL:BT002960 | EMBL:BT015792 | EMBL:BT021997 | Symbol:CKL13 |
GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 | GO:GO:0005488 |
GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
GO:GO:0006464 | GO:GO:0006468 | GO:GO:0006810 | GO:GO:0006897 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0008360 | GO:GO:0009506 | GO:GO:0009653 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016301 |
GO:GO:0016310 | GO:GO:0016740 | GO:GO:0018105 | GO:GO:0019538 | GO:GO:0030054 | InterPro:IPR000719 |
InterPro:Kinase-like_dom_sf | RefSeq:NP_171939.1 | ProteinID:OAP19866.1 | PFAM:PF00069 | PO:PO:0000013 | PO:PO:0000037 |
PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 |
PANTHER:PTHR11909 | PANTHER:PTHR11909:SF178 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | UniProt:Q5XF24 | SMART:SM00220 |
SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI00000529F5 | SEG:seg | : | : |
Description
CKL13Casein kinase 1-like protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF24]
Coordinates
chr1:+:1202160..1206009
Molecular Weight (calculated)
53207.6 Da
IEP (calculated)
10.344
GRAVY (calculated)
-0.578
Length
468 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRVVGGKFK LGRKLGSGSF GEIFLGVNVQ TGEEVAVKLE PLRARHPQLH YESKLYMLLQ GGTGIPHLKW FGVEGEFNCM VIDLLGPSME EFFNYCSRSF
101: SLKTVLMLAD QMINRVEYMH VKGFLHRDIK PDNFLMGLGR KANQVYIIDY GLAKKYRDLQ THKHIPYREN KNLTGTARYA SVNTHLGIEQ SRRDDLESLG
201: YLLMYFLRGS LPWQGLRAGT KKQKYDKISE KKRLTPVEVL CKNFPPEFTS YFLYVRSLRF EDKPDYSYLK RLFRDLFIRE GYQFDYVFDW TILRYPQFGS
301: SSSSNSKPRP TLRPAMNIPV PSADKAEKPP IGQDSRERFS GVFEAYTRRN GSGTGVQADQ SSRPRTSENV LASKDTQNQE RPNSLSRNLS SSRKAIAGSS
401: VRATSSADFT ENRLSRLIPN NDRSSTTLRT QFAPSSSSVA TKAAPTRAAR DITLQSLELL SIGNSKRK
101: SLKTVLMLAD QMINRVEYMH VKGFLHRDIK PDNFLMGLGR KANQVYIIDY GLAKKYRDLQ THKHIPYREN KNLTGTARYA SVNTHLGIEQ SRRDDLESLG
201: YLLMYFLRGS LPWQGLRAGT KKQKYDKISE KKRLTPVEVL CKNFPPEFTS YFLYVRSLRF EDKPDYSYLK RLFRDLFIRE GYQFDYVFDW TILRYPQFGS
301: SSSSNSKPRP TLRPAMNIPV PSADKAEKPP IGQDSRERFS GVFEAYTRRN GSGTGVQADQ SSRPRTSENV LASKDTQNQE RPNSLSRNLS SSRKAIAGSS
401: VRATSSADFT ENRLSRLIPN NDRSSTTLRT QFAPSSSSVA TKAAPTRAAR DITLQSLELL SIGNSKRK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.