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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY18127 Canola cytosol 87.56 89.38
Bra023732.1-P Field mustard cytosol 87.56 89.38
CDY66573 Canola cytosol 87.33 89.15
VIT_05s0049g01240.t01 Wine grape cytosol 81.0 77.16
AT4G14340.1 Thale cress cytosol 78.73 76.15
KRH34398 Soybean nucleus 77.83 76.11
Solyc06g053560.2.1 Tomato cytosol 74.89 74.89
KRG92405 Soybean cytosol 77.15 74.78
Solyc09g090250.2.1 Tomato nucleus 76.02 72.41
AT5G43320.1 Thale cress cytosol 75.34 69.38
AT1G04440.1 Thale cress cytosol 73.08 69.02
AT1G03930.1 Thale cress cytosol 71.72 67.3
AT4G08800.1 Thale cress cytosol 43.21 67.02
AT4G28540.1 Thale cress cytosol 72.17 66.6
AT5G44100.1 Thale cress cytosol 70.81 65.76
AT5G57015.1 Thale cress cytosol 56.56 57.47
AT2G19470.1 Thale cress cytosol 56.11 57.27
AT1G72710.1 Thale cress cytosol 59.5 56.56
AT4G26100.1 Thale cress cytosol 57.01 56.0
AT4G28880.1 Thale cress cytosol 51.81 55.18
AT4G28860.1 Thale cress cytosol 51.58 55.07
AT2G25760.2 Thale cress cytosol 32.58 21.3
AT5G18190.2 Thale cress cytosol 31.22 19.97
AT3G03940.1 Thale cress cytosol, plastid 31.0 19.54
AT3G13670.1 Thale cress cytosol 30.54 19.2
AT3G03930.1 Thale cress nucleus 8.37 12.89
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.4.1EntrezGene:821915UniProt:A0A178VL59ProteinID:AEE76754.1ArrayExpress:AT3G23340
EnsemblPlantsGene:AT3G23340RefSeq:AT3G23340TAIR:AT3G23340RefSeq:AT3G23340-TAIR-GEnsemblPlants:AT3G23340.1TAIR:AT3G23340.1
EMBL:AY054179EMBL:AY074556EMBL:AY943849ProteinID:BAB02278.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0006464GO:GO:0006468
GO:GO:0006810GO:GO:0006897GO:GO:0008150GO:GO:0008152GO:GO:0008360GO:GO:0009506
GO:GO:0009653GO:GO:0009987GO:GO:0016043GO:GO:0016301GO:GO:0016310GO:GO:0016740
GO:GO:0018105GO:GO:0019538GO:GO:0030054InterPro:IPR000719InterPro:Kinase-like_dom_sfRefSeq:NP_188976.1
ProteinID:OAP06458.1PFAM:PF00069PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293
PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0004507PO:PO:0007064PO:PO:0007095
PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616
PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0020030PO:PO:0020038
PO:PO:0020100PO:PO:0020137PO:PO:0025022ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PANTHER:PTHR11909PANTHER:PTHR11909:SF178InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSUniProt:Q9LW62SMART:SM00220
SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI00000AA04AEMBL:X78819Symbol:ckl10SEG:seg
Description
CKL10Casein kinase 1-like protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LW62]
Coordinates
chr3:+:8350803..8354021
Molecular Weight (calculated)
50383.5 Da
IEP (calculated)
9.962
GRAVY (calculated)
-0.581
Length
442 amino acids
Sequence
(BLAST)
001: MDHVIGGKFK LGRKIGSGSF GELYIGINVQ TGEEVALKLE PVKTKHPQLH YESKVYMLLQ GGTGVPHIKW FGVEGNYNCM AIDLLGPSLE DLFNYCTRSF
101: SLKTVLMLAD QLINRVEYMH SRGFLHRDIK PDNFLMGLGR KANQVYIIDY GLAKKYRDLQ THKHIPYREN KNLTGTARYA SVNTHLGIEQ SRRDDLESLG
201: YVLMYFIRGS LPWQGLKAGT KKQKYEKISE KKMLTPVEVL CKSYPSEFTS YFHYCRSLRF EDKPDYSYLK RLFRDLFIRE GYQFDYVFDW TILKYPQSGS
301: ISKPRPNPKP ALDPPGPSAE RNEKPIVGQD LRERFSGAVE AFARRNVPSH GIRPKHIFSD DASKEVQVSE KTRNEIATKM AVMSSSQPGS SGELSENRSS
401: KLFSSSAQKI QPVQETKLSA RLGRDDGLRS FDMLTIGSGK RK
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.