Factsheet for Bra023732.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra009495.1-P
Bra010842.1-P
Bra012583.1-P
Bra013335.1-P
Bra030129.1-P
Bra034367.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23340.1	Bra010842.1-P	AT1G29240.1	21798944
AT3G23340.1	Bra030129.1-P	AT1G29240.1	21798944
AT3G23340.1	Bra034367.1-P	AT2G27770.1	21798944
AT3G23340.1	Bra012583.1-P	AT4G18630.1	21798944
AT3G23340.1	Bra013335.1-P	AT4G18630.1	21798944
AT3G23340.1	Bra009495.1-P	AT5G03990.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18127	Canola	cytosol	99.77	99.77
AT3G23340.1	Thale cress	cytosol	89.38	87.56
VIT_05s0049g01240.t01	Wine grape	cytosol	82.22	76.72
KRH34398	Soybean	nucleus	79.21	75.89
KRG92405	Soybean	cytosol	78.98	75.0
Solyc06g053560.2.1	Tomato	cytosol	76.44	74.89
Bra010762.1-P	Field mustard	cytosol	77.37	74.11
Solyc09g090250.2.1	Tomato	nucleus	77.83	72.63
Bra027483.1-P	Field mustard	cytosol	77.6	69.71
Bra035974.1-P	Field mustard	cytosol	76.21	69.47
Bra015317.1-P	Field mustard	cytosol	72.29	68.34
Bra032511.1-P	Field mustard	cytosol	73.67	68.31
Bra032536.1-P	Field mustard	cytosol	70.9	67.47
Bra010361.1-P	Field mustard	cytosol	74.13	67.15
Bra011038.1-P	Field mustard	cytosol	73.9	66.53
Bra035646.1-P	Field mustard	cytosol	55.2	66.39
Bra027528.1-P	Field mustard	cytosol	72.29	65.48
Bra006839.1-P	Field mustard	cytosol	57.74	58.14
Bra002771.1-P	Field mustard	cytosol	57.74	57.74
Bra016039.1-P	Field mustard	cytosol	60.51	56.34
Bra008043.1-P	Field mustard	cytosol	60.51	56.34
Bra013949.1-P	Field mustard	cytosol	59.58	56.09
Bra036721.1-P	Field mustard	cytosol	56.58	56.06
Bra011067.1-P	Field mustard	cytosol	52.19	54.2
Bra024191.1-P	Field mustard	cytosol	37.18	53.14
Bra024179.1-P	Field mustard	cytosol, plastid	50.12	50.7
Bra007778.1-P	Field mustard	cytosol	32.33	23.33
Bra006445.1-P	Field mustard	cytosol	32.79	20.91
Bra023667.1-P	Field mustard	cytosol	32.79	20.76
Bra002140.1-P	Field mustard	cytosol	32.56	20.41
Bra036426.1-P	Field mustard	cytosol	32.33	19.89
Bra021498.1-P	Field mustard	cytosol	31.18	19.77
Bra027409.1-P	Field mustard	cytosol, plastid	31.18	19.59
Bra001518.1-P	Field mustard	cytosol	30.72	19.47
Bra031961.1-P	Field mustard	cytosol	32.33	17.46
Bra013948.1-P	Field mustard	cytosol	3.23	3.23

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.4.1	EnsemblPlantsGene:Bra023732	EnsemblPlants:Bra023732.1	EnsemblPlants:Bra023732.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M4E4M9	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR11909	PANTHER:PTHR11909:SF178	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002543D8A	SEG:seg	:	:

Description

AT3G23340 (E=3e-217) ckl10 | ckl10 (Casein Kinase I-like 10); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase

Coordinates

chrA01:-:19444551..19447370

Molecular Weight (calculated)

49324.1 Da

IEP (calculated)

9.973

GRAVY (calculated)

-0.607

Length

433 amino acids

Sequence
(BLAST)

001: MEHVIGGKFK LSRKIGSGSF GEIYIGSNVQ TGEEVAVKLE PVKTKHPQLH YESKVYMLLQ GGSGIPHLKW YGVEGEYNCM AIDLLGPSLE DLFNYCTRSF
101: SLKTVLMLAD QLINRVEYMH IRGFLHRDIK PDNFLMGLGR KANQVYIIDY GLAKKYRDLQ THKHIPYREN KNLTGTARYA SVNTHLGIEQ SRRDDLESLG
201: YVLMYFLRGS LPWQGLKAGT KKQKYDKISE RKMLTPVELL CKSFPSEFTS YFHYCRSLRF EDKPDYSYLK RLFRDLFIRE GYQFDYVFDW TILKYPQMGS
301: SSRSKPNPKA ALDTPGPSAE KGEMPSEGKD LRERFSGAVE AFARRNVWSP GIRSSKEVLV SEKTRNESAR AVMSSSRPGS SGELSENRSS KLFSSGTQKI
401: QPGQESKPTA RLGRNDDALR SFDLLTIGSG KRK

Best Arabidopsis Sequence Match ( AT3G23340.1 )
(BLAST)

001: MDHVIGGKFK LGRKIGSGSF GELYIGINVQ TGEEVALKLE PVKTKHPQLH YESKVYMLLQ GGTGVPHIKW FGVEGNYNCM AIDLLGPSLE DLFNYCTRSF
101: SLKTVLMLAD QLINRVEYMH SRGFLHRDIK PDNFLMGLGR KANQVYIIDY GLAKKYRDLQ THKHIPYREN KNLTGTARYA SVNTHLGIEQ SRRDDLESLG
201: YVLMYFIRGS LPWQGLKAGT KKQKYEKISE KKMLTPVEVL CKSYPSEFTS YFHYCRSLRF EDKPDYSYLK RLFRDLFIRE GYQFDYVFDW TILKYPQSGS
301: ISKPRPNPKP ALDPPGPSAE RNEKPIVGQD LRERFSGAVE AFARRNVPSH GIRPKHIFSD DASKEVQVSE KTRNEIATKM AVMSSSQPGS SGELSENRSS
401: KLFSSSAQKI QPVQETKLSA RLGRDDGLRS FDMLTIGSGK RK

Arabidopsis Description

CKL10Casein kinase 1-like protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LW62]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.