Factsheet for Bra032511.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53188	Canola	cytosol	99.57	99.57
Bra015317.1-P	Field mustard	cytosol	87.15	88.86
AT1G04440.1	Thale cress	cytosol	88.22	88.03
Bra035974.1-P	Field mustard	cytosol	83.3	81.89
Bra027483.1-P	Field mustard	cytosol	84.37	81.74
Bra023732.1-P	Field mustard	cytosol	68.31	73.67
Solyc09g090230.1.1	Tomato	cytosol, nucleus	17.99	72.41
Os02t0810400-01	Rice	cytosol	69.38	70.13
KXG31326	Sorghum	cytosol	69.59	69.74
Zm00001d018440_P002	Maize	cytosol	69.81	69.66
Bra010762.1-P	Field mustard	cytosol	67.24	69.47
TraesCS6D01G362500.1	Wheat	cytosol	69.81	68.92
TraesCS6A01G378000.1	Wheat	cytosol	69.81	68.92
Zm00001d051951_P002	Maize	cytosol	68.95	68.8
TraesCS6B01G415700.2	Wheat	cytosol	69.81	68.2
Bra010361.1-P	Field mustard	cytosol	66.6	65.06
Bra032536.1-P	Field mustard	cytosol	63.38	65.05
Bra027528.1-P	Field mustard	cytosol	66.17	64.64
Bra035646.1-P	Field mustard	cytosol	49.68	64.44
Bra011038.1-P	Field mustard	cytosol	65.52	63.62
Bra006839.1-P	Field mustard	cytosol	52.89	57.44
Bra002771.1-P	Field mustard	cytosol	53.1	57.27
Solyc09g090240.1.1	Tomato	cytosol	23.34	55.9
Bra013949.1-P	Field mustard	cytosol	54.39	55.22
Bra016039.1-P	Field mustard	cytosol	54.39	54.62
Bra008043.1-P	Field mustard	cytosol	54.39	54.62
Bra036721.1-P	Field mustard	cytosol	50.54	54.0
Bra011067.1-P	Field mustard	cytosol	47.75	53.48
Bra024191.1-P	Field mustard	cytosol	32.33	49.84
Bra024179.1-P	Field mustard	cytosol, plastid	44.97	49.07
Bra007778.1-P	Field mustard	cytosol	31.05	24.17
Bra006445.1-P	Field mustard	cytosol	30.41	20.91
Bra023667.1-P	Field mustard	cytosol	30.41	20.76
Bra002140.1-P	Field mustard	cytosol	30.41	20.55
Bra021498.1-P	Field mustard	cytosol	29.76	20.35
Bra001518.1-P	Field mustard	cytosol	29.34	20.06
Bra027409.1-P	Field mustard	cytosol, plastid	29.55	20.03
Bra036426.1-P	Field mustard	cytosol	29.55	19.6
Bra031961.1-P	Field mustard	cytosol	29.34	17.08
Bra013948.1-P	Field mustard	cytosol	2.36	2.53
Os02t0810500-01	Rice	cytosol, plasma membrane	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.4.1	EnsemblPlantsGene:Bra032511	EnsemblPlants:Bra032511.1	EnsemblPlants:Bra032511.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M4EUM9	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR11909	PANTHER:PTHR11909:SF178	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002543618	SEG:seg

Description

AT1G04440 (E=1e-230) CKL13 | CKL13 (CASEIN KINASE LIKE 13); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase

Coordinates

chrA09:-:36376241..36378978

Molecular Weight (calculated)

53144.6 Da

IEP (calculated)

10.407

GRAVY (calculated)

-0.567

Length

467 amino acids

Sequence
(BLAST)

001: MDRVVGGKFK LGRKLGSGSF GEIFLGVNVQ TGDEVAVKLE PLRSRHPQLH YESKLYMLLQ GGTGIPHLKW FGVESEYNCM VIDLLGPSLE EFFNYCSRSF
101: SLKTVLMLAD QMLNRVEYMH VRGFLHRDIK PDNFLMGLGR KANQVYIIDY GLAKKYRDLQ THKHIPYRDN KNLTGTARYA SVNTHLGIEQ SRRDDLESLG
201: YMLMYFLRGS LPWQGLRAGT KKQKYDKISE KKRLTPVEVL CKNFPPEFTS YFLYVRSLRF EDKPDYSYLK KLFRDLFIRE GYQFDYVFDW TILRYPQFGS
301: SSSSNARPRP SLRPALNIPI PPSAEKAEKP STGQGTRDRL SGVFEAYTRR NGSGTGVQAD WSSRPRTSEN VFASRDTFNK ERPITISRNQ SLSRKAVAGS
401: SVRATSSADF LENRSSRVVL NNGRPATTQR TQFPPPSSSL ATKSAAPSRL PPDVTLEFLT IGNGKRK

Best Arabidopsis Sequence Match ( AT1G04440.1 )
(BLAST)

001: MDRVVGGKFK LGRKLGSGSF GEIFLGVNVQ TGEEVAVKLE PLRARHPQLH YESKLYMLLQ GGTGIPHLKW FGVEGEFNCM VIDLLGPSME EFFNYCSRSF
101: SLKTVLMLAD QMINRVEYMH VKGFLHRDIK PDNFLMGLGR KANQVYIIDY GLAKKYRDLQ THKHIPYREN KNLTGTARYA SVNTHLGIEQ SRRDDLESLG
201: YLLMYFLRGS LPWQGLRAGT KKQKYDKISE KKRLTPVEVL CKNFPPEFTS YFLYVRSLRF EDKPDYSYLK RLFRDLFIRE GYQFDYVFDW TILRYPQFGS
301: SSSSNSKPRP TLRPAMNIPV PSADKAEKPP IGQDSRERFS GVFEAYTRRN GSGTGVQADQ SSRPRTSENV LASKDTQNQE RPNSLSRNLS SSRKAIAGSS
401: VRATSSADFT ENRLSRLIPN NDRSSTTLRT QFAPSSSSVA TKAAPTRAAR DITLQSLELL SIGNSKRK

Arabidopsis Description

CKL13Casein kinase 1-like protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.