Factsheet for TraesCS5B01G000400.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G000600.2	Wheat	cytosol	99.5	99.5
TraesCS5D01G000900.1	Wheat	cytosol	99.33	99.33
HORVU5Hr1G000060.5	Barley	cytosol	93.3	93.61
Zm00001d041186_P002	Maize	nucleus	86.93	86.64
OQU79738	Sorghum	nucleus	87.77	84.93
GSMUA_Achr11P...	Banana	cytosol	82.41	82.0
CDY23629	Canola	cytosol	68.68	78.1
TraesCS1B01G143100.4	Wheat	cytosol	76.88	75.62
Solyc12g100310.1.1	Tomato	nucleus	75.71	75.08
CDY55141	Canola	cytosol	78.73	74.37
GSMUA_Achr8P16690_001	Banana	endoplasmic reticulum, plasma membrane	81.57	72.47
CDX75726	Canola	mitochondrion	78.56	71.93
CDX97505	Canola	mitochondrion	78.39	71.67
CDX82524	Canola	mitochondrion	78.39	71.56
TraesCS3B01G160600.1	Wheat	cytosol	73.37	71.45
KRH01814	Soybean	nucleus	79.4	70.54
KRH46874	Soybean	nucleus	79.4	70.54
GSMUA_Achr6P11480_001	Banana	plastid	81.74	69.52
KRG93028	Soybean	cytosol	77.72	69.36
KRH36274	Soybean	nucleus	77.72	69.05
CDY51730	Canola	cytosol	78.89	68.86
Bra021498.1-P	Field mustard	cytosol	78.39	68.52
Bra001518.1-P	Field mustard	cytosol	78.06	68.23
Bra027409.1-P	Field mustard	cytosol, plastid	78.39	67.92
Solyc01g006120.2.1	Tomato	nucleus	77.39	67.74
VIT_06s0004g01090.t01	Wine grape	nucleus	80.74	67.51
TraesCS3B01G308800.1	Wheat	cytosol	74.2	66.72
AT3G13670.1	Thale cress	cytosol	78.39	66.57
PGSC0003DMT400081865	Potato	cytosol	66.5	64.66
TraesCS5B01G433800.1	Wheat	cytosol	57.62	63.47
TraesCS5B01G433300.1	Wheat	mitochondrion	72.19	60.88
TraesCS3B01G342600.2	Wheat	nucleus	71.02	59.3
TraesCS2B01G260100.1	Wheat	cytosol	46.4	53.27
TraesCS3B01G281100.2	Wheat	cytosol	24.79	31.29
TraesCS3B01G181900.3	Wheat	cytosol	20.94	30.94
TraesCS1B01G481100.2	Wheat	cytosol	24.46	30.8
TraesCS3B01G238800.4	Wheat	cytosol	24.62	30.12
TraesCS6B01G256000.1	Wheat	cytosol	23.28	29.83
TraesCS5B01G428600.3	Wheat	cytosol	23.28	29.26
TraesCS6B01G218400.1	Wheat	cytosol	19.77	29.21
TraesCS6B01G415700.2	Wheat	cytosol	22.61	28.24
TraesCS1B01G476600.1	Wheat	mitochondrion	8.21	6.94

Protein Annotations

Gene3D:1.10.510.10	MapMan:12.3.6.2	MapMan:18.4.4.2	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0006468	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009628	GO:GO:0009791	GO:GO:0009987	GO:GO:0016043
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0048574	GO:GO:1990164	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR11909
PANTHER:PTHR11909:SF207	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:TraesCS5B01G000400	EnsemblPlants:TraesCS5B01G000400.2	TIGR:cd14016	SEG:seg	:	:

Description

No Description!

Coordinates

chr5B:+:210311..215424

Molecular Weight (calculated)

66615.9 Da

IEP (calculated)

8.704

GRAVY (calculated)

-0.470

Length

597 amino acids

Sequence
(BLAST)

001: MADSGGVSAN NAAAGNDDEE GNTAPFPETV QIGGSPEYRV ERKLGKGGFG HVFVGRRLTG GNGRGAGAHE VAIKFEHNTS KGCNYGPPYE WHVYSALGGT
101: HGVPKVHYKG RQGDYYVMIM DMLGPSLWDS WNSAGQTMSS EMVACIAAEA ISILESMHSK GYVHGDVKPE NFLLGQPGTP QEKKLFLVDL GLATKWKDPA
201: TQQHVDYDQR PDAFRGTVRY ASAHAHLGRT ASRRDDLESL AYTLVFLHRG RLPWQGYQGD NKSFLVCKRK MSTSPDILCG LCPQPFKLFL ETVVNMKFDE
301: EPNYSKLISL FDVLIGPNPS IRPINTDGAQ KVGQKRSRLL NDDDDSNARK KIRLGVPATQ WISVYNSRSP MKQRYHYNVA DNRLAPHVEK GNEDGLLISS
401: ISSCVDLWAI IMDAGTGFTD QVYELSPHFL HKDWIMEQWE KNFYISSVAG ANIGSSLVVM SKGTPYTQQS YKVSDSFPFK WINKKWKEGF YVTSMATSGS
501: RWAIVMSRNA GFTDQVVELD FLYPSEGVHR RWDNGYRITA MAATVDQSAL ILSMPRRRPR DETQETLRTS QFPSAHVKDK WAKNLYLAGI CYGRTVA

Best Arabidopsis Sequence Match ( AT3G13670.1 )
(BLAST)

001: MPELRRGVRR GRVTDAVAPN QLPQTPTEKK PKKSTVKAPK PVAGGVTGVA ERPRTRLAAR KLKEEDKEIP QEIPVVVPSK DSDIDKNKGK EVVVEEEKKD
101: MAIGNDSGGS NKAAAQEEEG NTAPFPERVQ VGGSPLYKVE RKLGKGGFGQ VFVGRRISGG NDRSAGASIL EVALKFEHRS SKGCNYGPPH EWQVYNTLGG
201: SHGVPRVHFK GRQGDYYVMV MDMLGPSLWD LWNTSGQAMS SEMVACIAVE SLSILEKMHA KGYVHGDVKP ENFLLGQPST SQEKKLFLVD LGLATKWREG
301: GSGQHVEYDQ RPDMFRGTVR YASAHAHLGR TASRRDDLES LAYTLIFLHR GRLPWQGYQG DNKSFLVCKK KMATSPDMLC CFCPPPFKQF LEIVVNMKFD
401: EEPNYGKLVS LFQDLLGENP AIRPINTEGA QKIIFQVGQK RGRLSIGEEE EDAPRKKVRL GVPATQWISI YNARQPMKQR YHYNVADIRL AQHIERGIAD
501: GLLISCVSSC SNLWALIMDA GTGFTHQVYE LSPVFLHKEW IMEQWEKNYY ISSIAGASNG SSLVVMSKGT QYTQQSYKVS DSFPFKWINK KWREGFHVTS
601: MATAGNRWGV VMSRNSGYSE QVVELDFLYP SEGIHRRWDG GFRITSTAAT TDQAALILSI PRRRLVDETQ ETLRTSQFPS THVKEKWGKN LYLASLSYGR
701: TVS

Arabidopsis Description

Casein kinase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LID3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.