Factsheet for GSMUA_Achr6P11480_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	80.34	94.0
GSMUA_Achr8P16690_001	Banana	endoplasmic reticulum, plasma membrane	83.76	87.5
CDY23629	Canola	cytosol	62.11	83.05
TraesCS5B01G000400.2	Wheat	cytosol	69.52	81.74
TraesCS5D01G000900.1	Wheat	cytosol	69.37	81.57
TraesCS5A01G000600.2	Wheat	cytosol	69.37	81.57
GSMUA_Achr9P25780_001	Banana	cytosol	66.95	81.31
CDY55141	Canola	cytosol	72.51	80.54
GSMUA_Achr6P26340_001	Banana	cytosol	69.23	80.2
CDX97505	Canola	mitochondrion	73.79	79.33
Solyc12g100310.1.1	Tomato	nucleus	67.81	79.07
GSMUA_Achr9P06110_001	Banana	cytosol	67.95	78.58
KRH01814	Soybean	nucleus	75.07	78.42
CDX75726	Canola	mitochondrion	72.79	78.37
HORVU5Hr1G000060.5	Barley	cytosol	66.38	78.32
KRH46874	Soybean	nucleus	74.93	78.27
GSMUA_Achr2P15650_001	Banana	cytosol	67.38	78.18
Zm00001d041186_P002	Maize	nucleus	66.67	78.13
CDX82524	Canola	mitochondrion	72.65	77.98
VIT_06s0004g01090.t01	Wine grape	nucleus	79.06	77.73
OQU79738	Sorghum	nucleus	67.66	76.99
Solyc01g006120.2.1	Tomato	nucleus	74.64	76.83
KRH36274	Soybean	nucleus	73.5	76.79
Bra021498.1-P	Field mustard	cytosol	74.22	76.28
KRG93028	Soybean	cytosol	72.65	76.23
CDY51730	Canola	cytosol	74.22	76.17
Bra027409.1-P	Field mustard	cytosol, plastid	74.36	75.76
Bra001518.1-P	Field mustard	cytosol	73.08	75.11
PGSC0003DMT400081865	Potato	cytosol	65.24	74.59
AT3G13670.1	Thale cress	cytosol	74.5	74.4
GSMUA_AchrUn_...	Banana	cytosol	39.32	73.8
GSMUA_Achr4P01010_001	Banana	plastid	71.23	73.1
GSMUA_Achr8P20360_001	Banana	cytosol	69.37	68.21
GSMUA_Achr9P00060_001	Banana	cytosol	21.94	67.84
GSMUA_AchrUn_...	Banana	cytosol	17.09	65.22
GSMUA_Achr9P00070_001	Banana	extracellular	16.1	51.13
GSMUA_Achr3P32290_001	Banana	cytosol	7.98	38.1
GSMUA_Achr8P19730_001	Banana	cytosol	13.39	31.54
GSMUA_Achr3P04680_001	Banana	cytosol	20.94	31.28
GSMUA_Achr7P13580_001	Banana	cytosol	20.94	31.28
GSMUA_Achr5P14540_001	Banana	cytosol	20.94	31.08
GSMUA_Achr4P09160_001	Banana	cytosol	20.37	30.43
GSMUA_Achr4P08690_001	Banana	cytosol	20.37	30.23
GSMUA_Achr6P35790_001	Banana	cytosol	20.37	30.17
GSMUA_Achr5P09640_001	Banana	cytosol	20.23	30.15
GSMUA_Achr10P...	Banana	cytosol	19.94	30.04
GSMUA_AchrUn_...	Banana	cytosol	20.09	29.81
GSMUA_AchrUn_...	Banana	cytosol	19.66	29.74
GSMUA_Achr7P14470_001	Banana	cytosol	18.23	29.56
GSMUA_Achr9P13290_001	Banana	cytosol	20.94	29.4
GSMUA_Achr7P24210_001	Banana	cytosol	19.94	29.17
GSMUA_Achr8P24940_001	Banana	cytosol	20.37	29.01
GSMUA_Achr2P19240_001	Banana	cytosol	17.66	28.57
GSMUA_Achr3P32300_001	Banana	endoplasmic reticulum, plasma membrane	11.4	20.67

Protein Annotations

Gene3D:1.10.510.10	MapMan:12.3.6.2	MapMan:18.4.4.2	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr6G11480_001	EnsemblPlants:GSMUA_Achr6P11480_001	EnsemblPlants:GSMUA_Achr6T11480_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0T646
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR11909	PANTHER:PTHR11909:SF207
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002958C92
SEG:seg	:	:	:	:	:

Description

CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G11480_001]

Coordinates

chr6:-:7621031..7629576

Molecular Weight (calculated)

78736.6 Da

IEP (calculated)

9.008

GRAVY (calculated)

-0.571

Length

702 amino acids

Sequence
(BLAST)

001: MRELRSGVRR GGRAPPPPPV DRTLRNTRAR AASKKPEVVA VAAGGSRRVR TRAAEARVAG KKSDQLKEVV VVEEEEEEEE EEEEEEKGKG RTKQPEEIRG
101: KETMGDDSGG LSANRVVGQE EEGNTTPFPE KVQIGNSPVY KVDRKLGKGG FGQVFVGRRV SGGIERTTGP SALEVAIKFE HRSSKGCNYG PPYEWQVYSA
201: LGGSYGVPRV HYKGRQGDYY VMVMDMLGPS LWDAWNTSGQ AMSTEMVACI AVESISILEN MHSKGYVHGD VKPENFLLGQ PATPQEKKLF LVDLGLATRW
301: KDACNSNHVE YDQRPDVFRG TVRYASVHAH LGRTASRRDD LESLAYTLIF LHRGRLPWQG YQGDNKSFLV CKKKMSTSPE MMCCLCPPPF KQFLEIVVNM
401: KFDEEPNYSK LISLFDGLIG PNPAVRPINT DGAQKVGQKR GRLTIDEEEE SQQRKKIRLG VPATQWISVY NARLPMKQRY HYNVADARLA QHVERGNEDG
501: LLISCVASCT NLWALIMDAG TGFTSQVYEL SPFFLHKEWI MDQWEKNYYI TSLAGANNGS SLVVMSKGTQ YTQQSYKVSE SFPFKWINKK WKEGFHVTSM
601: ATAGTRWGIV MSRNAGFSDQ VVELDFLYPS EGIHRRWDGG YRITSMAATW DQAALILSVP KRKPGDETQE TLRTSSFPSA HVKDKWAKNL YLASICYGRT
701: VS

Best Arabidopsis Sequence Match ( AT3G13670.1 )
(BLAST)

001: MPELRRGVRR GRVTDAVAPN QLPQTPTEKK PKKSTVKAPK PVAGGVTGVA ERPRTRLAAR KLKEEDKEIP QEIPVVVPSK DSDIDKNKGK EVVVEEEKKD
101: MAIGNDSGGS NKAAAQEEEG NTAPFPERVQ VGGSPLYKVE RKLGKGGFGQ VFVGRRISGG NDRSAGASIL EVALKFEHRS SKGCNYGPPH EWQVYNTLGG
201: SHGVPRVHFK GRQGDYYVMV MDMLGPSLWD LWNTSGQAMS SEMVACIAVE SLSILEKMHA KGYVHGDVKP ENFLLGQPST SQEKKLFLVD LGLATKWREG
301: GSGQHVEYDQ RPDMFRGTVR YASAHAHLGR TASRRDDLES LAYTLIFLHR GRLPWQGYQG DNKSFLVCKK KMATSPDMLC CFCPPPFKQF LEIVVNMKFD
401: EEPNYGKLVS LFQDLLGENP AIRPINTEGA QKIIFQVGQK RGRLSIGEEE EDAPRKKVRL GVPATQWISI YNARQPMKQR YHYNVADIRL AQHIERGIAD
501: GLLISCVSSC SNLWALIMDA GTGFTHQVYE LSPVFLHKEW IMEQWEKNYY ISSIAGASNG SSLVVMSKGT QYTQQSYKVS DSFPFKWINK KWREGFHVTS
601: MATAGNRWGV VMSRNSGYSE QVVELDFLYP SEGIHRRWDG GFRITSTAAT TDQAALILSI PRRRLVDETQ ETLRTSQFPS THVKEKWGKN LYLASLSYGR
701: TVS

Arabidopsis Description

Casein kinase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LID3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.