Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90256 | Canola | cytosol | 97.99 | 96.9 |
| CDY12761 | Canola | cytosol | 86.35 | 86.55 |
| AT4G14340.1 | Thale cress | cytosol | 87.92 | 86.0 |
| CDY49413 | Canola | cytosol | 86.13 | 84.99 |
| CDY10056 | Canola | cytosol | 31.54 | 80.57 |
| CDY66573 | Canola | cytosol | 75.17 | 77.6 |
| VIT_05s0049g01240.t01 | Wine grape | cytosol | 80.31 | 77.37 |
| CDY18127 | Canola | cytosol | 74.94 | 77.37 |
| KRH34398 | Soybean | nucleus | 75.84 | 75.0 |
| Solyc06g053560.2.1 | Tomato | cytosol | 74.05 | 74.89 |
| KRG92405 | Soybean | cytosol | 75.39 | 73.9 |
| Solyc09g090250.2.1 | Tomato | nucleus | 74.94 | 72.2 |
| CDY14235 | Canola | cytosol | 70.47 | 68.18 |
| CDX89823 | Canola | cytosol | 70.02 | 67.46 |
| CDY32520 | Canola | cytosol | 68.46 | 67.11 |
| CDY54479 | Canola | cytosol | 71.59 | 67.09 |
| CDY14873 | Canola | cytosol | 71.14 | 66.95 |
| CDY56353 | Canola | cytosol | 71.59 | 66.95 |
| CDX97446 | Canola | cytosol | 69.57 | 66.88 |
| CDY10089 | Canola | cytosol | 68.01 | 66.81 |
| CDY32954 | Canola | cytosol | 72.04 | 66.81 |
| CDY43608 | Canola | cytosol | 72.04 | 66.81 |
| CDY18233 | Canola | cytosol | 70.02 | 66.31 |
| CDY35198 | Canola | cytosol | 70.25 | 66.24 |
| CDY69732 | Canola | cytosol | 68.9 | 66.24 |
| CDY53188 | Canola | cytosol | 69.13 | 66.17 |
| CDY13126 | Canola | cytosol | 70.69 | 66.11 |
| CDY38379 | Canola | cytosol | 70.02 | 66.03 |
| CDY36972 | Canola | cytosol | 70.69 | 65.97 |
| CDX92883 | Canola | cytosol | 70.47 | 65.49 |
| CDY51704 | Canola | cytosol | 70.25 | 65.28 |
| CDX70305 | Canola | cytosol | 42.06 | 63.51 |
| CDY20695 | Canola | cytosol | 55.7 | 59.57 |
| CDY32908 | Canola | cytosol | 55.48 | 59.19 |
| CDX88601 | Canola | cytosol | 56.6 | 58.84 |
| CDY38255 | Canola | cytosol | 56.38 | 58.6 |
| CDY11892 | Canola | cytosol | 56.38 | 58.6 |
| CDY54387 | Canola | cytosol | 56.38 | 58.2 |
| CDX94377 | Canola | cytosol | 58.17 | 56.52 |
| CDY49859 | Canola | cytosol | 58.17 | 55.91 |
| CDX96430 | Canola | cytosol | 57.49 | 55.27 |
| CDY53866 | Canola | cytosol | 54.81 | 54.93 |
| CDX72938 | Canola | cytosol | 57.27 | 54.12 |
| CDX92899 | Canola | cytosol | 50.78 | 53.92 |
| CDY06860 | Canola | cytosol | 49.89 | 53.48 |
| CDY50929 | Canola | cytosol | 50.34 | 53.44 |
| CDY35229 | Canola | cytosol | 48.99 | 52.52 |
| CDY69293 | Canola | cytosol | 40.04 | 51.44 |
| CDX82685 | Canola | cytosol, nucleus, vacuole | 21.25 | 30.55 |
| CDX76739 | Canola | cytosol | 32.66 | 24.33 |
| CDY11509 | Canola | cytosol | 30.65 | 24.25 |
| CDY21505 | Canola | cytosol | 32.89 | 23.9 |
| CDY23629 | Canola | cytosol | 27.07 | 23.05 |
| CDY55141 | Canola | cytosol | 31.1 | 21.99 |
| CDX97505 | Canola | mitochondrion | 31.1 | 21.29 |
| CDX75726 | Canola | mitochondrion | 30.87 | 21.17 |
| CDX82524 | Canola | mitochondrion | 30.87 | 21.1 |
| CDX70801 | Canola | cytosol | 31.99 | 20.91 |
| CDY51243 | Canola | cytosol | 31.99 | 20.91 |
| CDY02641 | Canola | cytosol | 31.54 | 20.55 |
| CDY51730 | Canola | cytosol | 31.1 | 20.32 |
| CDY38493 | Canola | cytosol | 31.32 | 20.29 |
| CDY25451 | Canola | cytosol | 31.1 | 20.14 |
| CDY29971 | Canola | cytosol | 30.87 | 19.63 |
| CDY21155 | Canola | cytosol | 30.65 | 19.46 |
| CDY42890 | Canola | cytosol | 30.43 | 19.43 |
| CDY53253 | Canola | plastid | 31.54 | 18.5 |
| CDY50866 | Canola | cytosol | 30.2 | 16.92 |
| CDY69292 | Canola | cytosol | 3.13 | 3.23 |
| CDX94378 | Canola | cytosol | 2.68 | 2.76 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.4.1 | GO:A0A078FGH1 | UniProt:A0A078FGH1 | EnsemblPlants:CDY12062 | ProteinID:CDY12062 |
| ProteinID:CDY12062.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00061017001 | InterPro:IPR000719 |
| InterPro:Kinase-like_dom_sf | PFAM:PF00069 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR11909 |
| PANTHER:PTHR11909:SF178 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| UniParc:UPI0004EE38AE | SEG:seg | : | : | : | : |
Description
BnaC03g59780DBnaC03g59780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FGH1]
Coordinates
chrLK032017:+:202985..205702
Molecular Weight (calculated)
50965.7 Da
IEP (calculated)
10.226
GRAVY (calculated)
-0.710
Length
447 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQVVIGGKF KLGRKLGSGS FGELYLGINI QTGEEVAVKL EPVKTRHPQL QYESKIYMFL QGGTGVPHLK WFGVEGGYSC MVIDLLGPSL EDLFNYSNRI
101: FSLKSVLMLA DQLICRVEYM HSRGFLHRDI KPDNFLMGLG RKANQVYIID YGLAKKYKDL QTQKHIPYRE NKNLTGTARY ASVNTHLGIE QSRRDDLESL
201: GYVLMYFLRG SLPWQGLKGG TKKQKYDKIS EKKMLTPAEI LCKSYPSEFT SYFHYCRSLR FEDKPDYSYL RRLFRDLFIR EGYQLDYVFD WTNLKYPQTG
301: SSSRPRPTPR PTLDLTGSPA DRSQKPTVGK DLRERFAGAI EAFTRRNVSS QGAAHGDRST RYRSSDVKKD KQESDRHRSS SRNGSRGVMS SSRPGSSAEN
401: RSSRLFSSTT QRVQESYESK PSSAAAGHED AIRRFELLTI GSGKKRK
101: FSLKSVLMLA DQLICRVEYM HSRGFLHRDI KPDNFLMGLG RKANQVYIID YGLAKKYKDL QTQKHIPYRE NKNLTGTARY ASVNTHLGIE QSRRDDLESL
201: GYVLMYFLRG SLPWQGLKGG TKKQKYDKIS EKKMLTPAEI LCKSYPSEFT SYFHYCRSLR FEDKPDYSYL RRLFRDLFIR EGYQLDYVFD WTNLKYPQTG
301: SSSRPRPTPR PTLDLTGSPA DRSQKPTVGK DLRERFAGAI EAFTRRNVSS QGAAHGDRST RYRSSDVKKD KQESDRHRSS SRNGSRGVMS SSRPGSSAEN
401: RSSRLFSSTT QRVQESYESK PSSAAAGHED AIRRFELLTI GSGKKRK
001: MDRNQKMDHV IGGKFKLGRK LGSGSFGELY LGINIQTGEE VAVKLEPVKT RHPQLQYESK IYMFLQGGTG VPHLKWFGVE GEYSCMVIDL LGPSLEDLFN
101: YCKRIFSLKS VLMLADQLIC RVEYMHSRGF LHRDIKPDNF LMGLGRRANQ VYIIDYGLAK KYKDLQTQKH IPYRENKNLT GTARYASVNT HLGIEQSRRD
201: DLESLGYVLM YFLRGSLPWQ GLKAGTKKQK YDKISEKKML TSVETLCKSY PSEFTSYFHY CRSLRFEDKP DYSYLRRLFR DLFIREGYQL DYVFDWTISK
301: YPQIGSSSRP RPTPRPALDP PGPPAERAEK PTVGQDLRGR FTGAIEAFTR RNVSSQGALG DRSRHRSSDD IPSSAKEVHE SRNGSTSKRG VISSTRPGSS
401: AEPSENHSSR LFSSGSRHAT TQRVPQSYES AAAARPGHED AIRNFELLTI GSGKKRK
101: YCKRIFSLKS VLMLADQLIC RVEYMHSRGF LHRDIKPDNF LMGLGRRANQ VYIIDYGLAK KYKDLQTQKH IPYRENKNLT GTARYASVNT HLGIEQSRRD
201: DLESLGYVLM YFLRGSLPWQ GLKAGTKKQK YDKISEKKML TSVETLCKSY PSEFTSYFHY CRSLRFEDKP DYSYLRRLFR DLFIREGYQL DYVFDWTISK
301: YPQIGSSSRP RPTPRPALDP PGPPAERAEK PTVGQDLRGR FTGAIEAFTR RNVSSQGALG DRSRHRSSDD IPSSAKEVHE SRNGSTSKRG VISSTRPGSS
401: AEPSENHSSR LFSSGSRHAT TQRVPQSYES AAAARPGHED AIRNFELLTI GSGKKRK
Arabidopsis Description
CKL11Casein kinase 1-like protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q39050]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.