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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY32520 Canola cytosol 98.02 97.81
Bra032536.1-P Field mustard cytosol 97.36 97.36
AT1G03930.1 Thale cress cytosol 87.47 84.5
CDY10056 Canola cytosol 30.77 80.0
CDY54479 Canola cytosol 83.3 79.45
CDY13126 Canola cytosol 82.64 78.66
CDY36972 Canola cytosol 82.64 78.5
KRG95693 Soybean cytosol 73.85 71.95
KRH67417 Soybean nucleus 73.41 71.37
CDY18127 Canola cytosol 67.69 71.13
KRH19588 Soybean cytosol, nucleus 70.77 71.08
KRH32213 Soybean cytosol 70.55 71.02
CDY14235 Canola cytosol 72.09 71.0
CDY66573 Canola cytosol 67.47 70.9
CDY35198 Canola cytosol 73.85 70.89
CDX92883 Canola cytosol 74.51 70.48
CDX97446 Canola cytosol 71.87 70.32
CDY51704 Canola cytosol 74.29 70.27
CDY38379 Canola cytosol 73.19 70.25
CDY12062 Canola cytosol 66.81 68.01
CDX90256 Canola cytosol 67.47 67.92
CDY12761 Canola cytosol 65.93 67.26
CDY49413 Canola cytosol 66.37 66.67
CDX70305 Canola cytosol 43.08 66.22
CDY14873 Canola cytosol 68.35 65.47
CDY56353 Canola cytosol 68.35 65.06
CDX89823 Canola cytosol 66.15 64.87
CDY43608 Canola cytosol 68.35 64.52
CDY32954 Canola cytosol 67.91 64.11
CDY53188 Canola cytosol 65.49 63.81
CDY18233 Canola cytosol 66.15 63.77
CDY69732 Canola cytosol 64.4 63.01
CDY38255 Canola cytosol 58.02 61.4
CDY20695 Canola cytosol 56.26 61.24
CDY32908 Canola cytosol 56.26 61.1
CDY54387 Canola cytosol 58.02 60.97
CDX88601 Canola cytosol 57.36 60.7
CDY11892 Canola cytosol 57.36 60.7
CDY49859 Canola cytosol 60.88 59.57
CDX94377 Canola cytosol 59.56 58.91
CDY53866 Canola cytosol 57.36 58.52
CDX96430 Canola cytosol 59.78 58.49
CDX72938 Canola cytosol 59.56 57.29
CDX92899 Canola cytosol 50.33 54.39
CDY06860 Canola cytosol 49.45 53.96
CDY50929 Canola cytosol 49.89 53.92
CDY35229 Canola cytosol 49.01 53.48
CDY69293 Canola cytosol 40.44 52.87
KRH66363 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole 29.01 51.76
CDX82685 Canola cytosol, nucleus, vacuole 21.98 32.15
CDY11509 Canola cytosol 30.55 24.6
CDX76739 Canola cytosol 32.31 24.5
CDY21505 Canola cytosol 32.53 24.07
CDY23629 Canola cytosol 27.03 23.43
CDY55141 Canola cytosol 30.99 22.31
CDX75726 Canola mitochondrion 31.21 21.78
CDX82524 Canola mitochondrion 31.21 21.71
CDX97505 Canola mitochondrion 30.77 21.44
CDX70801 Canola cytosol 30.99 20.61
CDY51730 Canola cytosol 30.99 20.61
CDY51243 Canola cytosol 30.99 20.61
CDY38493 Canola cytosol 30.99 20.43
CDY25451 Canola cytosol 30.99 20.43
CDY02641 Canola cytosol 30.77 20.41
CDY21155 Canola cytosol 30.77 19.89
CDY42890 Canola cytosol 30.55 19.86
CDY29971 Canola cytosol 30.55 19.77
CDY53253 Canola plastid 30.55 18.24
CDY50866 Canola cytosol 30.33 17.29
CDX94378 Canola cytosol 2.42 2.53
CDY69292 Canola cytosol 2.42 2.53
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.4.1GO:A0A078FAN0UniProt:A0A078FAN0EnsemblPlants:CDY10089ProteinID:CDY10089
ProteinID:CDY10089.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674
GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00031889001InterPro:IPR000719
InterPro:Kinase-like_dom_sfPFAM:PF00069ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR11909
PANTHER:PTHR11909:SF114InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EECDA3SEG:seg::::
Description
BnaC08g43620DBnaC08g43620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FAN0]
Coordinates
chrLK032000:-:887117..889777
Molecular Weight (calculated)
50987.5 Da
IEP (calculated)
10.457
GRAVY (calculated)
-0.674
Length
455 amino acids
Sequence
(BLAST)
001: MDLVIGGKFK LGRKIGSGSF GQLYLGVNVQ TGEEVAVKLE SVKTKHPQLH YESKLYMLLQ GGSGIPNIKW YGVDGEYNVM VIDLLGPSLE DLFNYCNRKL
101: SLKTVLMLAD QLINRVEYMH TRGFLHRDIK PDNFLMGLGR KANQVYIIDF GLGKKYRDLQ THRHIPYREN KNLTGTARYA SVNTHLGVEQ SRRDDMEAVG
201: YVLIYFLKGS LPWQGLKAGT RKQKYDRISE KKVSTPIEVL CRNQPSEFVS YFSYCRSLRF DDKPDYSYLK RLFRDLFIRE GYQFDYVFDW TVLKHPQTGS
301: SSSSSSRTRD HTTNVKPELT AGKQERTAGN RLSGAVEAFS RRHVTPRDRS ASRNSDDVPV GGESERRGSS SRNGSSSRRA IASSSRPSSA GGPSDSRSSS
401: RLVTSSGGGG MGSTSQRMGP GGYESKKSST LSRGARNTRG DPLRRSFELL SLRKS
Best Arabidopsis Sequence Match ( AT1G03930.1 )
(BLAST)
001: MDLVIGGKFK LGRKIGSGSF GELYLGINVQ TGEEVAVKLE SVKTKHPQLH YESKLYMLLQ GGTGVPNLKW YGVEGDYNVM VIDLLGPSLE DLFNYCNRKL
101: SLKTVLMLAD QLINRVEFMH TRGFLHRDIK PDNFLMGLGR KANQVYIIDF GLGKKYRDLQ THRHIPYREN KNLTGTARYA SVNTHLGVEQ SRRDDLEALG
201: YVLMYFLKGS LPWQGLKAGT KKQKYDRISE KKVATPIEVL CKNQPSEFVS YFRYCRSLRF DDKPDYSYLK RLFRDLFIRE GYQFDYVFDW TVLKYPQIGS
301: SSGSSSRTRN HTTANPGLTA GASLEKQERI AGKETRENRF SGAVEAFSRR HPATSTTRDR SASRNSVDGP LSKHPPGDSE RPRSSSRYGS SSRRAIPSSS
401: RPSSAGGPSD SRSSSRLVTS TGGVGTVSNR ASTSQRIQAG NESRTSSFSR AARNTREDPL RRSLELLTLR K
Arabidopsis Description
CKL9Casein kinase 1-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZWB3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.