Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49413 | Canola | cytosol | 96.19 | 94.7 |
| AT4G14340.1 | Thale cress | cytosol | 89.69 | 87.53 |
| CDY12062 | Canola | cytosol | 86.55 | 86.35 |
| CDX90256 | Canola | cytosol | 86.1 | 84.96 |
| CDY10056 | Canola | cytosol | 31.61 | 80.57 |
| CDY66573 | Canola | cytosol | 75.56 | 77.83 |
| CDY18127 | Canola | cytosol | 75.34 | 77.6 |
| VIT_05s0049g01240.t01 | Wine grape | cytosol | 80.27 | 77.16 |
| KRH34398 | Soybean | nucleus | 76.01 | 75.0 |
| Solyc06g053560.2.1 | Tomato | cytosol | 73.77 | 74.43 |
| KRG92405 | Soybean | cytosol | 75.78 | 74.12 |
| Solyc09g090250.2.1 | Tomato | nucleus | 74.44 | 71.55 |
| CDY14235 | Canola | cytosol | 70.85 | 68.4 |
| CDX97446 | Canola | cytosol | 70.63 | 67.74 |
| CDY14873 | Canola | cytosol | 71.97 | 67.58 |
| CDY56353 | Canola | cytosol | 72.2 | 67.36 |
| CDY35198 | Canola | cytosol | 71.3 | 67.09 |
| CDY54479 | Canola | cytosol | 71.08 | 66.46 |
| CDY38379 | Canola | cytosol | 70.63 | 66.46 |
| CDY32954 | Canola | cytosol | 71.75 | 66.39 |
| CDY43608 | Canola | cytosol | 71.75 | 66.39 |
| CDY32520 | Canola | cytosol | 67.71 | 66.23 |
| CDY53188 | Canola | cytosol | 69.28 | 66.17 |
| CDX92883 | Canola | cytosol | 71.3 | 66.11 |
| CDY13126 | Canola | cytosol | 70.85 | 66.11 |
| CDY36972 | Canola | cytosol | 70.85 | 65.97 |
| CDY10089 | Canola | cytosol | 67.26 | 65.93 |
| CDY51704 | Canola | cytosol | 71.08 | 65.9 |
| CDY69732 | Canola | cytosol | 68.61 | 65.81 |
| CDX89823 | Canola | cytosol | 68.39 | 65.73 |
| CDY18233 | Canola | cytosol | 68.61 | 64.83 |
| CDX70305 | Canola | cytosol | 41.7 | 62.84 |
| CDY20695 | Canola | cytosol | 55.16 | 58.85 |
| CDX88601 | Canola | cytosol | 56.5 | 58.6 |
| CDY38255 | Canola | cytosol | 56.5 | 58.6 |
| CDY32908 | Canola | cytosol | 54.93 | 58.47 |
| CDY11892 | Canola | cytosol | 56.28 | 58.37 |
| CDY54387 | Canola | cytosol | 56.5 | 58.2 |
| CDX94377 | Canola | cytosol | 58.07 | 56.3 |
| CDY49859 | Canola | cytosol | 58.3 | 55.91 |
| CDX96430 | Canola | cytosol | 57.85 | 55.48 |
| CDY53866 | Canola | cytosol | 55.16 | 55.16 |
| CDX72938 | Canola | cytosol | 57.62 | 54.33 |
| CDY06860 | Canola | cytosol | 50.0 | 53.48 |
| CDX92899 | Canola | cytosol | 50.45 | 53.44 |
| CDY50929 | Canola | cytosol | 50.45 | 53.44 |
| CDY35229 | Canola | cytosol | 49.1 | 52.52 |
| CDY69293 | Canola | cytosol | 39.01 | 50.0 |
| CDX82685 | Canola | cytosol, nucleus, vacuole | 21.97 | 31.51 |
| CDX76739 | Canola | cytosol | 32.74 | 24.33 |
| CDY11509 | Canola | cytosol | 30.72 | 24.25 |
| CDY21505 | Canola | cytosol | 32.74 | 23.74 |
| CDY23629 | Canola | cytosol | 26.91 | 22.86 |
| CDY55141 | Canola | cytosol | 30.94 | 21.84 |
| CDX75726 | Canola | mitochondrion | 30.94 | 21.17 |
| CDX97505 | Canola | mitochondrion | 30.94 | 21.13 |
| CDX82524 | Canola | mitochondrion | 30.94 | 21.1 |
| CDX70801 | Canola | cytosol | 31.84 | 20.76 |
| CDY51243 | Canola | cytosol | 31.84 | 20.76 |
| CDY02641 | Canola | cytosol | 31.61 | 20.55 |
| CDY38493 | Canola | cytosol | 31.39 | 20.29 |
| CDY51730 | Canola | cytosol | 30.94 | 20.18 |
| CDY25451 | Canola | cytosol | 31.17 | 20.14 |
| CDY29971 | Canola | cytosol | 30.94 | 19.63 |
| CDY21155 | Canola | cytosol | 30.72 | 19.46 |
| CDY42890 | Canola | cytosol | 30.49 | 19.43 |
| CDY53253 | Canola | plastid | 31.39 | 18.37 |
| CDY50866 | Canola | cytosol | 30.27 | 16.92 |
| CDY69292 | Canola | cytosol | 2.91 | 3.0 |
| CDX94378 | Canola | cytosol | 2.47 | 2.53 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.4.1 | GO:A0A078FHR8 | UniProt:A0A078FHR8 | EnsemblPlants:CDY12761 | ProteinID:CDY12761 |
| ProteinID:CDY12761.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00070352001 | InterPro:IPR000719 |
| InterPro:Kinase-like_dom_sf | PFAM:PF00069 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR11909 |
| PANTHER:PTHR11909:SF178 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| UniParc:UPI0004EF14A0 | SEG:seg | : | : | : | : |
Description
BnaC04g28800DBnaC04g28800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FHR8]
Coordinates
chrLK032026:-:719651..722650
Molecular Weight (calculated)
50786.6 Da
IEP (calculated)
9.980
GRAVY (calculated)
-0.708
Length
446 amino acids
Sequence
(BLAST)
(BLAST)
001: MERNQKKMDH VIGGKFKLGR KLGSGSFGEL YLGINIQTGE EVAVKLEPVK TRHPQLQYES KIYMHLQGGT GVPHLKWFGV EGDYSCMVID LLGPSLEDLF
101: NYCTRKFTLK SVLMLADQLI CRVEYMHSRG FLHRDIKPDN FLMGLGRKAN QVYIIDYGLA KKYKDLQTQK HIPYRENKNL TGTARYASVN THLGIEQSRR
201: DDLESLGYVL MYFLRGSLPW QGLKGGTKKQ KYDKISEKKM LTPVEILCKS HPSEFTSYFH YCRSLRFEDK PDYSYLRRLF RDLFIREGYQ LDYLFDWTTL
301: KYPQTGSTSR PRLTPLDPPP GPPAEISEKP TVGQDLRGRF SGAIEAFTRR NVSSQGAHGD RSRQRSSDDV PSSSKEVHES DRNPSSKRGV ISPGSSAEPS
401: ENRSSRLFSR GSRLATTQEN YESKPSSASG IRSFELLTIG SAKNKK
101: NYCTRKFTLK SVLMLADQLI CRVEYMHSRG FLHRDIKPDN FLMGLGRKAN QVYIIDYGLA KKYKDLQTQK HIPYRENKNL TGTARYASVN THLGIEQSRR
201: DDLESLGYVL MYFLRGSLPW QGLKGGTKKQ KYDKISEKKM LTPVEILCKS HPSEFTSYFH YCRSLRFEDK PDYSYLRRLF RDLFIREGYQ LDYLFDWTTL
301: KYPQTGSTSR PRLTPLDPPP GPPAEISEKP TVGQDLRGRF SGAIEAFTRR NVSSQGAHGD RSRQRSSDDV PSSSKEVHES DRNPSSKRGV ISPGSSAEPS
401: ENRSSRLFSR GSRLATTQEN YESKPSSASG IRSFELLTIG SAKNKK
001: MDRNQKMDHV IGGKFKLGRK LGSGSFGELY LGINIQTGEE VAVKLEPVKT RHPQLQYESK IYMFLQGGTG VPHLKWFGVE GEYSCMVIDL LGPSLEDLFN
101: YCKRIFSLKS VLMLADQLIC RVEYMHSRGF LHRDIKPDNF LMGLGRRANQ VYIIDYGLAK KYKDLQTQKH IPYRENKNLT GTARYASVNT HLGIEQSRRD
201: DLESLGYVLM YFLRGSLPWQ GLKAGTKKQK YDKISEKKML TSVETLCKSY PSEFTSYFHY CRSLRFEDKP DYSYLRRLFR DLFIREGYQL DYVFDWTISK
301: YPQIGSSSRP RPTPRPALDP PGPPAERAEK PTVGQDLRGR FTGAIEAFTR RNVSSQGALG DRSRHRSSDD IPSSAKEVHE SRNGSTSKRG VISSTRPGSS
401: AEPSENHSSR LFSSGSRHAT TQRVPQSYES AAAARPGHED AIRNFELLTI GSGKKRK
101: YCKRIFSLKS VLMLADQLIC RVEYMHSRGF LHRDIKPDNF LMGLGRRANQ VYIIDYGLAK KYKDLQTQKH IPYRENKNLT GTARYASVNT HLGIEQSRRD
201: DLESLGYVLM YFLRGSLPWQ GLKAGTKKQK YDKISEKKML TSVETLCKSY PSEFTSYFHY CRSLRFEDKP DYSYLRRLFR DLFIREGYQL DYVFDWTISK
301: YPQIGSSSRP RPTPRPALDP PGPPAERAEK PTVGQDLRGR FTGAIEAFTR RNVSSQGALG DRSRHRSSDD IPSSAKEVHE SRNGSTSKRG VISSTRPGSS
401: AEPSENHSSR LFSSGSRHAT TQRVPQSYES AAAARPGHED AIRNFELLTI GSGKKRK
Arabidopsis Description
CKL11Casein kinase 1-like protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q39050]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.