CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 2
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, peroxisome, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	peroxisome
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009495.1-P	Field mustard	plastid	96.07	87.99
CDY41412	Canola	nucleus	60.66	70.61
AT5G03990.1	Thale cress	nucleus, plastid	47.21	47.68
TraesCS5A01G135600.1	Wheat	nucleus	24.26	24.75
TraesCS5D01G142200.1	Wheat	nucleus	23.28	23.75
Os11t0140900-01	Rice	nucleus	20.98	23.36
TraesCS5B01G134500.1	Wheat	nucleus	22.62	22.85
GSMUA_AchrUn_...	Banana	nucleus	26.56	22.82
HORVU5Hr1G043530.1	Barley	nucleus	21.97	22.33
Os01t0801200-01	Rice	nucleus	24.59	21.99
EES03760	Sorghum	nucleus	23.93	21.47
Zm00001d043187_P001	Maize	nucleus	23.93	21.41
Zm00001d012569_P001	Maize	nucleus	23.61	21.36
TraesCS3B01G360400.1	Wheat	nucleus	24.59	21.31
TraesCS3A01G330400.1	Wheat	nucleus	24.26	21.08
TraesCS3D01G323800.1	Wheat	nucleus	24.26	20.96
OQU82840	Sorghum	nucleus	19.34	20.92
Zm00001d052461_P001	Maize	nucleus	19.34	20.85
KXG22825	Sorghum	mitochondrion, nucleus	20.98	20.32
Zm00001d023249_P001	Maize	mitochondrion, nucleus	21.31	20.31
Os12t0137400-00	Rice	endoplasmic reticulum, nucleus	20.33	20.2
Zm00001d010383_P001	Maize	cytosol	22.62	19.33
Zm00001d016089_P001	Maize	extracellular, plasma membrane, vacuole	18.03	18.52
CDX73674	Canola	mitochondrion, nucleus	23.28	17.03
CDX78048	Canola	mitochondrion, nucleus	23.28	16.86
Zm00001d044634_P002	Maize	nucleus	21.97	16.42
KXG22824	Sorghum	nucleus	13.77	15.0
KXG22823	Sorghum	nucleus	20.66	14.06

Protein Annotations

EnsemblPlants:CDX70268	EnsemblPlantsGene:GSBRNA2T00136411001	PANTHER:PTHR34567	PANTHER:PTHR34567:SF2	ProteinID:CDX70268	ProteinID:CDX70268.1
SEG:seg	UniParc:UPI0004EECE87	MapMan:35.2	:	:	:

Description

BnaA10g26170D

Coordinates

chrLK031790:-:3856093..3857917

Molecular Weight (calculated)

35359.1 Da

IEP (calculated)

6.017

GRAVY (calculated)

-1.331

Length

305 amino acids

Sequence
(BLAST)

001: MSNWRRQKPR NSNNNNNNYN NHHHQQRGMT MTQSPKPPLA NCKQSVPAWE KDFCAKVGSV PWSKVLEAKR FMHLYERVVQ WDDSAGEDAF NKAKSHYWAE
101: INGVSCDLPL PDPDVYIDDV DWDAQVDNEL VLDLERGGPD PRTREGEGEG EERVVILDAL FSSGQYSGQG WGTGWGDAEG VKEKNVGWDD QGCDGWNQDS
201: WGRKEEPVGW GHEDENNNSF RRETWEYKNR NSFNYKKVGN WNGNDHHHQG REWRKRGAVP REGEQVDDCR WRNGRGRSRG GFQQHSNVLV YYTKRLEESP
301: EYSSK

Best Arabidopsis Sequence Match ( AT5G03990.1 )
(BLAST)

001: MSNWRRQKPR NNNSNNYSRQ RGTTMTQSSS KPPLANCKIS VPAWEKDFCA VIGSVPWWKV VEAKRFMHIY DRVVQWDDSA GEDAFKNAKS RFWAEINGLT
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF

Arabidopsis Description

FK506-binding-like protein [Source:UniProtKB/TrEMBL;Acc:Q93XY4]
SUBAcon: [nucleus,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.