Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX73674 | Canola | mitochondrion, nucleus | 85.27 | 86.09 |
| Bra006884.1-P | Field mustard | plastid | 88.84 | 61.31 |
| AT3G51940.2 | Thale cress | mitochondrion, nucleus | 40.86 | 37.64 |
| CDY41412 | Canola | nucleus | 15.91 | 25.57 |
| CDX70268 | Canola | plastid | 16.86 | 23.28 |
| KRH62921 | Soybean | nucleus | 17.34 | 20.56 |
| VIT_08s0007g05940.t01 | Wine grape | nucleus | 17.58 | 18.64 |
| KRH29960 | Soybean | nucleus | 15.68 | 18.18 |
| Solyc01g068170.2.1 | Tomato | nucleus | 16.39 | 16.35 |
| PGSC0003DMT400017586 | Potato | nucleus | 18.53 | 12.6 |
| Zm00001d044509_P001 | Maize | nucleus | 4.99 | 8.97 |
Protein Annotations
| EnsemblPlants:CDX78048 | EnsemblPlantsGene:GSBRNA2T00129334001 | PANTHER:PTHR34567 | PANTHER:PTHR34567:SF3 | ProteinID:CDX78048 | ProteinID:CDX78048.1 |
| SEG:seg | UniParc:UPI0004EDECE0 | MapMan:35.2 | : | : | : |
Description
BnaA09g32430D
Coordinates
chrLK031814:-:821228..822711
Molecular Weight (calculated)
48676.0 Da
IEP (calculated)
5.509
GRAVY (calculated)
-1.347
Length
421 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKWNNRSRF NRRRSPSRWY SERPSSSSSS SGYGEDDGIP VWEKRFCEVI GSVPWRKVVE ATNFKSWYTG NVITWDDSAC QETFHNEKKR FWSQVNGVHC
101: DISLPDPDLY VSDVDWDTTV DPELISDLEG AYFAPPDDEV KSGLKRGRRD RSWSGCSNLV PIEEARMLKI PWEGSEEVRD VDGFVKKGNG WNVAESSSDH
201: PNDGTRPWEA KPSFGNEKAN DTMSGDCLWK ETEWKTEDRG NDRWGQGNDG WEQSGQQNKK AKGSESVPAR EDEMLDNPWE AKLSCRKETA EDTAWGGWSG
301: KGWDDRGCGS GGWEKRDLEM NEWRRTRCSQ DYREPRSYSP WKAGFGPDNT ARREYGANAG GWQTRRVSET NRREWDVKRS SDGWGRRNRE RDESYGYNSN
401: YRNSRPIRDD YQSRKVNFSS K
101: DISLPDPDLY VSDVDWDTTV DPELISDLEG AYFAPPDDEV KSGLKRGRRD RSWSGCSNLV PIEEARMLKI PWEGSEEVRD VDGFVKKGNG WNVAESSSDH
201: PNDGTRPWEA KPSFGNEKAN DTMSGDCLWK ETEWKTEDRG NDRWGQGNDG WEQSGQQNKK AKGSESVPAR EDEMLDNPWE AKLSCRKETA EDTAWGGWSG
301: KGWDDRGCGS GGWEKRDLEM NEWRRTRCSQ DYREPRSYSP WKAGFGPDNT ARREYGANAG GWQTRRVSET NRREWDVKRS SDGWGRRNRE RDESYGYNSN
401: YRNSRPIRDD YQSRKVNFSS K
001: MGKWNHRSRH HRRRSPERWY SGRQSSSSSV YCEDDGIPVW EKRFCEVIGS VPWQKVVEAK DFKSWYNGNV ITWDDSACED TFHNEKKRFW SQVNGLHCDV
101: SIPDPDLYIS EVDWDTFVDP ELIRDLEKAY FAPPDDVNIG FKRGRGDKNW SGCDTVPEAR MLETPWKNSD DIIETGKKSS GWNLTEGSSW EAKPCCVNEK
201: ANDTASGGCL TTEEWRENQW IAKDRVNDSW EYSGQGKDDG WDKSGHQNKK VKGSEEYKKI DNPWEAQPSC IKETAKDTTW GGCSGEGWED RGWNNDSWGS
301: GGWDNRDLGN QGMEMKEWRG KGYSRDFREP KGCNPWKGGF VPDNVAFRES GVNAGGWQTC RGSETKQINW DVKRASDGWG RQNDNAALRE YGANAGDWQR
401: RRGCEGNQRN WDAKRTGDGW GRQNKERVDS YGYHSNYKNS WPRRDDYQNR KVNFSTK
101: SIPDPDLYIS EVDWDTFVDP ELIRDLEKAY FAPPDDVNIG FKRGRGDKNW SGCDTVPEAR MLETPWKNSD DIIETGKKSS GWNLTEGSSW EAKPCCVNEK
201: ANDTASGGCL TTEEWRENQW IAKDRVNDSW EYSGQGKDDG WDKSGHQNKK VKGSEEYKKI DNPWEAQPSC IKETAKDTTW GGCSGEGWED RGWNNDSWGS
301: GGWDNRDLGN QGMEMKEWRG KGYSRDFREP KGCNPWKGGF VPDNVAFRES GVNAGGWQTC RGSETKQINW DVKRASDGWG RQNDNAALRE YGANAGDWQR
401: RRGCEGNQRN WDAKRTGDGW GRQNKERVDS YGYHSNYKNS WPRRDDYQNR KVNFSTK
Arabidopsis Description
Oxidoreductase/transition metal ion-binding protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSU7]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.