Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400017586 | Potato | nucleus | 68.48 | 46.69 |
| Os11t0140900-01 | Rice | nucleus | 17.06 | 26.28 |
| TraesCS5D01G142200.1 | Wheat | nucleus | 18.01 | 25.42 |
| KXG22825 | Sorghum | mitochondrion, nucleus | 18.96 | 25.4 |
| HORVU5Hr1G043530.1 | Barley | nucleus | 18.01 | 25.33 |
| TraesCS5A01G135600.1 | Wheat | nucleus | 17.54 | 24.75 |
| TraesCS5B01G134500.1 | Wheat | nucleus | 17.3 | 24.17 |
| TraesCS3A01G330400.1 | Wheat | nucleus | 19.43 | 23.36 |
| TraesCS3B01G360400.1 | Wheat | nucleus | 19.43 | 23.3 |
| TraesCS3D01G323800.1 | Wheat | nucleus | 19.43 | 23.23 |
| Os01t0801200-01 | Rice | nucleus | 18.72 | 23.17 |
| OQU82840 | Sorghum | nucleus | 15.17 | 22.7 |
| Os12t0137400-00 | Rice | endoplasmic reticulum, nucleus | 15.88 | 21.82 |
| GSMUA_AchrUn_... | Banana | nucleus | 18.25 | 21.69 |
| EES03760 | Sorghum | nucleus | 17.3 | 21.47 |
| VIT_08s0007g05940.t01 | Wine grape | nucleus | 18.25 | 19.4 |
| KXG22824 | Sorghum | nucleus | 12.8 | 19.29 |
| KRH62921 | Soybean | nucleus | 15.64 | 18.59 |
| KRH29960 | Soybean | nucleus | 15.88 | 18.46 |
| KXG22823 | Sorghum | nucleus | 18.96 | 17.86 |
| CDX78048 | Canola | mitochondrion, nucleus | 16.35 | 16.39 |
| CDX73674 | Canola | mitochondrion, nucleus | 15.88 | 16.07 |
| AT3G51940.2 | Thale cress | mitochondrion, nucleus | 15.4 | 14.22 |
| Bra006884.1-P | Field mustard | plastid | 16.35 | 11.31 |
| Zm00001d044509_P001 | Maize | nucleus | 4.98 | 8.97 |
Protein Annotations
| EnsemblPlants:Solyc01g068170.2.1 | EnsemblPlantsGene:Solyc01g068170.2 | PANTHER:PTHR34567 | PANTHER:PTHR34567:SF3 | SEG:seg | UniParc:UPI0002763380 |
| UniProt:K4AX65 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr1:+:77275592..77280884
Molecular Weight (calculated)
48511.8 Da
IEP (calculated)
7.334
GRAVY (calculated)
-1.282
Length
422 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNWNRRRWI PRKKYKQEDL PPSQPYQYNQ SPYHAIQENS APLWEIDFCR VAGIPWHKVV SAKTYMDCYE NVVKWDDSAG QEAFNVAKRR YWAKISGFPP
101: QNPPPNPDLY IDKVDWDSAI DPELILDLDR EYFNPNEVKN SVKSENNLDP GCTLVWEDKT ADNGENPWGS GNVQGSKTAA NGENPWESGN VQDSKPVGNR
201: ENPWESASIE DTKQTWNEWY TPVNIKNDNP WERSSPKTQG ILKGTAWGGC GNESWGWNSG MNYQNGYACV DNSFSNLWYR SGACVSGAKG NEWVDNSVGS
301: WGQTCWNTGG HEQRNSDYGS RWNRNFSRGG GTTSKDRRRR GSEGTSWDYQ QQPRQSNDRN VDFGRPSRGN STFYSGSRKR ESSSQHVPRY KSSRFQSDEQ
401: RTANNWREEN TQKRVTFNSM YD
101: QNPPPNPDLY IDKVDWDSAI DPELILDLDR EYFNPNEVKN SVKSENNLDP GCTLVWEDKT ADNGENPWGS GNVQGSKTAA NGENPWESGN VQDSKPVGNR
201: ENPWESASIE DTKQTWNEWY TPVNIKNDNP WERSSPKTQG ILKGTAWGGC GNESWGWNSG MNYQNGYACV DNSFSNLWYR SGACVSGAKG NEWVDNSVGS
301: WGQTCWNTGG HEQRNSDYGS RWNRNFSRGG GTTSKDRRRR GSEGTSWDYQ QQPRQSNDRN VDFGRPSRGN STFYSGSRKR ESSSQHVPRY KSSRFQSDEQ
401: RTANNWREEN TQKRVTFNSM YD
001: MGKWNHRSRH HRRRSPERWY SGRQSSSSSV YCEDDGIPVW EKRFCEVIGS VPWQKVVEAK DFKSWYNGNV ITWDDSACED TFHNEKKRFW SQVNGLHCDV
101: SIPDPDLYIS EVDWDTFVDP ELIRDLEKAY FAPPDDVNIG FKRGRGDKNW SGCDTVPEAR MLETPWKNSD DIIETGKKSS GWNLTEGSSW EAKPCCVNEK
201: ANDTASGGCL TTEEWRENQW IAKDRVNDSW EYSGQGKDDG WDKSGHQNKK VKGSEEYKKI DNPWEAQPSC IKETAKDTTW GGCSGEGWED RGWNNDSWGS
301: GGWDNRDLGN QGMEMKEWRG KGYSRDFREP KGCNPWKGGF VPDNVAFRES GVNAGGWQTC RGSETKQINW DVKRASDGWG RQNDNAALRE YGANAGDWQR
401: RRGCEGNQRN WDAKRTGDGW GRQNKERVDS YGYHSNYKNS WPRRDDYQNR KVNFSTK
101: SIPDPDLYIS EVDWDTFVDP ELIRDLEKAY FAPPDDVNIG FKRGRGDKNW SGCDTVPEAR MLETPWKNSD DIIETGKKSS GWNLTEGSSW EAKPCCVNEK
201: ANDTASGGCL TTEEWRENQW IAKDRVNDSW EYSGQGKDDG WDKSGHQNKK VKGSEEYKKI DNPWEAQPSC IKETAKDTTW GGCSGEGWED RGWNNDSWGS
301: GGWDNRDLGN QGMEMKEWRG KGYSRDFREP KGCNPWKGGF VPDNVAFRES GVNAGGWQTC RGSETKQINW DVKRASDGWG RQNDNAALRE YGANAGDWQR
401: RRGCEGNQRN WDAKRTGDGW GRQNKERVDS YGYHSNYKNS WPRRDDYQNR KVNFSTK
Arabidopsis Description
Oxidoreductase/transition metal ion-binding protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSU7]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.