Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 1
- nucleus 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
HORVU5Hr1G043530.1 | Barley | nucleus | 92.31 | 92.0 |
TraesCS5A01G135600.1 | Wheat | nucleus | 90.97 | 90.97 |
TraesCS5B01G134500.1 | Wheat | nucleus | 85.62 | 84.77 |
Os11t0140900-01 | Rice | nucleus | 45.82 | 50.0 |
OQU82840 | Sorghum | nucleus | 45.48 | 48.23 |
Zm00001d052461_P001 | Maize | nucleus | 43.81 | 46.29 |
Os12t0137400-00 | Rice | endoplasmic reticulum, nucleus | 44.15 | 43.0 |
Zm00001d023249_P001 | Maize | mitochondrion, nucleus | 42.47 | 39.69 |
KXG22825 | Sorghum | mitochondrion, nucleus | 41.14 | 39.05 |
CDY41412 | Canola | nucleus | 22.07 | 25.19 |
TraesCS3D01G323800.1 | Wheat | nucleus | 29.43 | 24.93 |
CDX70268 | Canola | plastid | 23.75 | 23.28 |
AT5G03990.1 | Thale cress | nucleus, plastid | 23.08 | 22.85 |
VIT_08s0007g05940.t01 | Wine grape | nucleus | 29.77 | 22.42 |
Bra009495.1-P | Field mustard | plastid | 23.75 | 21.32 |
Solyc01g068170.2.1 | Tomato | nucleus | 25.42 | 18.01 |
KRH29960 | Soybean | nucleus | 20.4 | 16.8 |
KRH62921 | Soybean | nucleus | 19.4 | 16.34 |
PGSC0003DMT400017586 | Potato | nucleus | 24.08 | 11.63 |
Protein Annotations
EnsemblPlants:TraesCS5D01G142200.1 | EnsemblPlantsGene:TraesCS5D01G142200 | PANTHER:PTHR34567 | PANTHER:PTHR34567:SF1 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr5D:-:228068184..228071670
Molecular Weight (calculated)
34328.5 Da
IEP (calculated)
6.837
GRAVY (calculated)
-1.318
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGRNRRWPT KRHHDASSNP RPPPPYSGYS HVDNQCQVPL WEREFCSLVG GISWQRFCEN KHFAYMYKEI EQWDDSGAFE NFQNAKSRFW SHYHGQPSDI
101: PYPDPDLYID EVDHRGEVDP ELVADLDKVR VPFEADNEPA VAANNRCAQN QTGNWDIYLE KPTPEVNKWE ADNSASNTGW AASQEPLSSW NKISTGWGDA
201: LAQPGWGSSS NNHCSGNNWN SSHGASSNNN TYYQDPCSAY GRKRNSGGGY SQQRNSKQRN QAESHHQRGR WQDHRDRGRH GERFPFDNRP NVQRAERGF
101: PYPDPDLYID EVDHRGEVDP ELVADLDKVR VPFEADNEPA VAANNRCAQN QTGNWDIYLE KPTPEVNKWE ADNSASNTGW AASQEPLSSW NKISTGWGDA
201: LAQPGWGSSS NNHCSGNNWN SSHGASSNNN TYYQDPCSAY GRKRNSGGGY SQQRNSKQRN QAESHHQRGR WQDHRDRGRH GERFPFDNRP NVQRAERGF
001: MSNWRRQKPR NNNSNNYSRQ RGTTMTQSSS KPPLANCKIS VPAWEKDFCA VIGSVPWWKV VEAKRFMHIY DRVVQWDDSA GEDAFKNAKS RFWAEINGLT
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
Arabidopsis Description
FK506-binding-like protein [Source:UniProtKB/TrEMBL;Acc:Q93XY4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.