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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 3
  • extracellular 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os12t0137400-00 Rice endoplasmic reticulum, nucleus 85.77 76.55
OQU82840 Sorghum nucleus 52.92 51.42
TraesCS5D01G142200.1 Wheat nucleus 50.0 45.82
HORVU5Hr1G043530.1 Barley nucleus 49.63 45.33
TraesCS5A01G135600.1 Wheat nucleus 49.27 45.15
TraesCS5B01G134500.1 Wheat nucleus 48.54 44.04
Zm00001d052461_P001 Maize nucleus 45.26 43.82
KXG22825 Sorghum mitochondrion, nucleus 46.72 40.63
Zm00001d023249_P001 Maize mitochondrion, nucleus 44.16 37.81
Os01t0801200-01 Rice nucleus 29.56 23.75
AT5G03990.1 Thale cress nucleus, plastid 25.55 23.18
CDY41412 Canola nucleus 20.07 20.99
CDX70268 Canola plastid 23.36 20.98
VIT_08s0007g05940.t01 Wine grape nucleus 28.47 19.65
Bra009495.1-P Field mustard plastid 22.99 18.92
KRH62921 Soybean nucleus 22.99 17.75
KRH29960 Soybean nucleus 22.63 17.08
Solyc01g068170.2.1 Tomato nucleus 26.28 17.06
PGSC0003DMT400017586 Potato nucleus 26.28 11.63
Protein Annotations
EnsemblPlants:Os11t0140900-01EnsemblPlantsGene:Os11g0140900EntrezGene:9269556PANTHER:PTHR34567PANTHER:PTHR34567:SF1ProteinID:BAH95071.1
ProteinID:BAT12613.1RefSeq:XP_015617330.1SEG:segUniParc:UPI00018F100EUniProt:C7J8R9MapMan:35.2
Description
Conserved hypothetical protein. (Os11t0140900-01)
Coordinates
chr11:+:1887131..1892676
Molecular Weight (calculated)
32388.9 Da
IEP (calculated)
7.605
GRAVY (calculated)
-1.334
Length
274 amino acids
Sequence
(BLAST)
001: MGNWNHHRRP WYRRTRHDRA PRPPSPPPDL GHNCHPIPLW EREFCIYVGG ISWHRFCDNK RYVCMYKNIE QWDDSEAFDN FKNAKARFWA NYHGQPSDIS
101: LPDPDMYIDK VDHNSKIDPE LIADLNMVRL PFEMDDELLP ADGLGSTDTD NKCQQRQNQS RNWDIYVEKP TEVNKWEQDS RSNMDWGTKH ESWNEWSKNC
201: SGWGSALADS SWGNWNNSNN HHSSNNRASF NGINRNRYQD PSSISGRKRN SGGYIQQRNS RQRNQIEGYQ GSRW
Best Arabidopsis Sequence Match ( AT5G03990.1 )
(BLAST)
001: MSNWRRQKPR NNNSNNYSRQ RGTTMTQSSS KPPLANCKIS VPAWEKDFCA VIGSVPWWKV VEAKRFMHIY DRVVQWDDSA GEDAFKNAKS RFWAEINGLT
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
Arabidopsis Description
FK506-binding-like protein [Source:UniProtKB/TrEMBL;Acc:Q93XY4]
SUBAcon: [plastid,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.