Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG22825 | Sorghum | mitochondrion, nucleus | 59.69 | 60.63 |
| Zm00001d052461_P001 | Maize | nucleus | 40.62 | 45.94 |
| Os11t0140900-01 | Rice | nucleus | 37.81 | 44.16 |
| TraesCS5D01G142200.1 | Wheat | nucleus | 39.69 | 42.47 |
| HORVU5Hr1G043530.1 | Barley | nucleus | 39.69 | 42.33 |
| TraesCS5A01G135600.1 | Wheat | nucleus | 39.38 | 42.14 |
| TraesCS5B01G134500.1 | Wheat | nucleus | 38.44 | 40.73 |
| Os12t0137400-00 | Rice | endoplasmic reticulum, nucleus | 35.94 | 37.46 |
| Zm00001d016089_P001 | Maize | extracellular, plasma membrane, vacuole | 26.56 | 28.62 |
| Zm00001d044634_P002 | Maize | nucleus | 31.56 | 24.75 |
| CDY41412 | Canola | nucleus | 18.44 | 22.52 |
| Zm00001d012569_P001 | Maize | nucleus | 23.12 | 21.96 |
| Zm00001d043187_P001 | Maize | nucleus | 23.12 | 21.7 |
| CDX70268 | Canola | plastid | 20.31 | 21.31 |
| AT5G03990.1 | Thale cress | nucleus, plastid | 20.0 | 21.19 |
| Bra009495.1-P | Field mustard | plastid | 20.62 | 19.82 |
| Zm00001d010383_P001 | Maize | cytosol | 18.44 | 16.53 |
| Zm00001d044509_P001 | Maize | nucleus | 5.94 | 8.12 |
Protein Annotations
| EMBL:BT035682 | EnsemblPlants:Zm00001d023249_P001 | EnsemblPlants:Zm00001d023249_T001 | EnsemblPlantsGene:Zm00001d023249 | EntrezGene:100193422 | PANTHER:PTHR34567 |
| PANTHER:PTHR34567:SF1 | ProteinID:AQK38714.1 | SEG:seg | UniParc:UPI00017B67EF | UniProt:B4FEZ4 | MapMan:35.2 |
Description
No Description!
Coordinates
chr10:-:1461166..1464360
Molecular Weight (calculated)
36230.9 Da
IEP (calculated)
6.672
GRAVY (calculated)
-1.192
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGWNRSLYV TGHRDRSAGA SRTPLPPPSP DYGDKHQQVP LWEREFCRHV GDITWEQFCE NKQYVGQFHK LEPWDDSAAF DCFQNAKARF WASYHGQPSD
101: IPLLDDPDLY IDKVDHQCEV DPELVADLDS VGLPFESDDN PASAKGWTNA GADNKCTQNG SGNWDAFVEK PAEVSKWDSE ANLASNTTWG GQANVATPEA
201: VWRGQSFSKW GNDSNTSRGV PLEKPSWRGC NKNRYTPNSW SSNFHSRPSD NRYQQLEDPS YTSGTGRKWN GGDGGGYVKQ RSFKHRNQDQ GQHQQPRSGS
301: WQQDQRGRSR QWRPVHSRAP
101: IPLLDDPDLY IDKVDHQCEV DPELVADLDS VGLPFESDDN PASAKGWTNA GADNKCTQNG SGNWDAFVEK PAEVSKWDSE ANLASNTTWG GQANVATPEA
201: VWRGQSFSKW GNDSNTSRGV PLEKPSWRGC NKNRYTPNSW SSNFHSRPSD NRYQQLEDPS YTSGTGRKWN GGDGGGYVKQ RSFKHRNQDQ GQHQQPRSGS
301: WQQDQRGRSR QWRPVHSRAP
001: MGKWNHRSRH HRRRSPERWY SGRQSSSSSV YCEDDGIPVW EKRFCEVIGS VPWQKVVEAK DFKSWYNGNV ITWDDSACED TFHNEKKRFW SQVNGLHCDV
101: SIPDPDLYIS EVDWDTFVDP ELIRDLEKAY FAPPDDVNIG FKRGRGDKNW SGCDTVPEAR MLETPWKNSD DIIETGKKSS GWNLTEGSSW EAKPCCVNEK
201: ANDTASGGCL TTEEWRENQW IAKDRVNDSW EYSGQGKDDG WDKSGHQNKK VKGSEEYKKI DNPWEAQPSC IKETAKDTTW GGCSGEGWED RGWNNDSWGS
301: GGWDNRDLGN QGMEMKEWRG KGYSRDFREP KGCNPWKGGF VPDNVAFRES GVNAGGWQTC RGSETKQINW DVKRASDGWG RQNDNAALRE YGANAGDWQR
401: RRGCEGNQRN WDAKRTGDGW GRQNKERVDS YGYHSNYKNS WPRRDDYQNR KVNFSTK
101: SIPDPDLYIS EVDWDTFVDP ELIRDLEKAY FAPPDDVNIG FKRGRGDKNW SGCDTVPEAR MLETPWKNSD DIIETGKKSS GWNLTEGSSW EAKPCCVNEK
201: ANDTASGGCL TTEEWRENQW IAKDRVNDSW EYSGQGKDDG WDKSGHQNKK VKGSEEYKKI DNPWEAQPSC IKETAKDTTW GGCSGEGWED RGWNNDSWGS
301: GGWDNRDLGN QGMEMKEWRG KGYSRDFREP KGCNPWKGGF VPDNVAFRES GVNAGGWQTC RGSETKQINW DVKRASDGWG RQNDNAALRE YGANAGDWQR
401: RRGCEGNQRN WDAKRTGDGW GRQNKERVDS YGYHSNYKNS WPRRDDYQNR KVNFSTK
Arabidopsis Description
Oxidoreductase/transition metal ion-binding protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSU7]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.