Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d016089_P001 | Maize | extracellular, plasma membrane, vacuole | 43.38 | 59.6 |
| KXG22823 | Sorghum | nucleus | 37.01 | 33.71 |
| Zm00001d023249_P001 | Maize | mitochondrion, nucleus | 24.75 | 31.56 |
| KXG22824 | Sorghum | nucleus | 21.57 | 31.43 |
| Zm00001d052461_P001 | Maize | nucleus | 21.57 | 31.1 |
| Zm00001d043187_P001 | Maize | nucleus | 20.83 | 24.93 |
| Zm00001d012569_P001 | Maize | nucleus | 20.59 | 24.93 |
| AT5G03990.1 | Thale cress | nucleus, plastid | 17.65 | 23.84 |
| CDY41412 | Canola | nucleus | 14.46 | 22.52 |
| CDX70268 | Canola | plastid | 16.42 | 21.97 |
| Bra009495.1-P | Field mustard | plastid | 16.42 | 20.12 |
| Zm00001d010383_P001 | Maize | cytosol | 17.16 | 19.61 |
| Zm00001d044509_P001 | Maize | nucleus | 5.39 | 9.4 |
Protein Annotations
| EnsemblPlants:Zm00001d044634_P002 | EnsemblPlants:Zm00001d044634_T002 | EnsemblPlantsGene:Zm00001d044634 | EntrezGene:103651662 | PANTHER:PTHR34567 | PANTHER:PTHR34567:SF1 |
| ProteinID:ONM42093.1 | SEG:seg | UniParc:UPI0004DEC898 | UniProt:A0A1D6NQ66 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr3:-:233672817..233675470
Molecular Weight (calculated)
45341.7 Da
IEP (calculated)
5.020
GRAVY (calculated)
-1.142
Length
408 amino acids
Sequence
(BLAST)
(BLAST)
001: MADWNRPWDV NAHCDRSGSD RRPPLPRPDS RDNYYPVPLW ERKFCRNAYG IPWKKFCEKK QFIELYKNVM DWDDSGALEN FEAAKERFRA KYHGEPFEDP
101: LLDPDMYIDE IDHLCEVDPE LVADLDKVPD VDKVLEQQLV ANLGCEEPVA DLVPMGHGEL GAIPTPTGWG EEDAIPTPTG WGEEDANLAP VGWGEPVANV
201: AAIGWGESAS LTPDTAWEGR NSGWNSPLDQ PQCTPSNWND NSYGDRSSNN WYQQEVDPSH MPFGTRRNLN GGGRGSSCRN SNGGVGNRNN NLYGGRSSNT
301: RYQQEVDPGR NSSGTRRKLN GGSGNRNNNF YGGGSSNNRY QQEVDPGRMS PGAGRKQNGG GRGCGRSGSK WNGGGGSGWQ QGQRGRRTRE MEWRPVQHKR
401: DPQDDPAA
101: LLDPDMYIDE IDHLCEVDPE LVADLDKVPD VDKVLEQQLV ANLGCEEPVA DLVPMGHGEL GAIPTPTGWG EEDAIPTPTG WGEEDANLAP VGWGEPVANV
201: AAIGWGESAS LTPDTAWEGR NSGWNSPLDQ PQCTPSNWND NSYGDRSSNN WYQQEVDPSH MPFGTRRNLN GGGRGSSCRN SNGGVGNRNN NLYGGRSSNT
301: RYQQEVDPGR NSSGTRRKLN GGSGNRNNNF YGGGSSNNRY QQEVDPGRMS PGAGRKQNGG GRGCGRSGSK WNGGGGSGWQ QGQRGRRTRE MEWRPVQHKR
401: DPQDDPAA
001: MSNWRRQKPR NNNSNNYSRQ RGTTMTQSSS KPPLANCKIS VPAWEKDFCA VIGSVPWWKV VEAKRFMHIY DRVVQWDDSA GEDAFKNAKS RFWAEINGLT
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
Arabidopsis Description
FK506-binding-like protein [Source:UniProtKB/TrEMBL;Acc:Q93XY4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.