Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d016089_P001 | Maize | extracellular, plasma membrane, vacuole | 27.9 | 42.09 |
| KXG22824 | Sorghum | nucleus | 25.0 | 40.0 |
| Zm00001d044634_P002 | Maize | nucleus | 33.71 | 37.01 |
| OQU82840 | Sorghum | nucleus | 20.98 | 33.33 |
| KXG22825 | Sorghum | mitochondrion, nucleus | 22.77 | 32.38 |
| EES03760 | Sorghum | nucleus | 17.63 | 23.24 |
| CDY41412 | Canola | nucleus | 12.95 | 22.14 |
| AT5G03990.1 | Thale cress | nucleus, plastid | 14.06 | 20.86 |
| CDX70268 | Canola | plastid | 14.06 | 20.66 |
| VIT_08s0007g05940.t01 | Wine grape | nucleus | 17.41 | 19.65 |
| Bra009495.1-P | Field mustard | plastid | 14.29 | 19.22 |
| Solyc01g068170.2.1 | Tomato | nucleus | 17.86 | 18.96 |
| KRH29960 | Soybean | nucleus | 12.05 | 14.88 |
| KRH62921 | Soybean | nucleus | 10.94 | 13.8 |
| PGSC0003DMT400017586 | Potato | nucleus | 18.97 | 13.73 |
Protein Annotations
| EnsemblPlants:KXG22823 | EnsemblPlantsGene:SORBI_3008G013000 | PANTHER:PTHR34567 | ProteinID:KXG22823 | ProteinID:KXG22823.1 | SEG:seg |
| UniParc:UPI00081ABEC4 | UniProt:A0A1B6PAX0 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr8:-:1102083..1106036
Molecular Weight (calculated)
48389.0 Da
IEP (calculated)
8.018
GRAVY (calculated)
-1.024
Length
448 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAWNRSRDV NSDPEHSGGS WRPPLPRPDN GDTVRPVPLW EREFCRNAYD IPWQTFCEKK RFIKILFKNV MDWDDSGAHK NFLDAKERFR AKYFGEPYED
101: PVENPDLYID EVDHHCEVNP ELVAGLDKIA GNDLVVDLGW GGMANMTPMS WGAPIGSLMP PGWGQPVPNL KPTGWGEPAN PTPDTAWAGT ANMTPMEWGA
201: PADNLIPPGW GQLVPNLKPT GWGEPANPTP DTASAGTANM TSMEWGAPVG NLIPPGWGQP VPNLKPTGWG EPANPTPDTA CGGQRNQTPG AVMGAQPYST
301: PNSSNNYLHG GRPSNNWQQQ GVDPGQTSSG TARMLGGGGG GGRNRNRGGG GGGRNRNRGG GGGGGRNRNH GGSGGFGSNW NGSGRSEQSI QHEGQQRQRT
401: GGGMQRNHQD EGQRQMRSMG RQQQGQRGRR MEWRPVQHNR APKDDPAA
101: PVENPDLYID EVDHHCEVNP ELVAGLDKIA GNDLVVDLGW GGMANMTPMS WGAPIGSLMP PGWGQPVPNL KPTGWGEPAN PTPDTAWAGT ANMTPMEWGA
201: PADNLIPPGW GQLVPNLKPT GWGEPANPTP DTASAGTANM TSMEWGAPVG NLIPPGWGQP VPNLKPTGWG EPANPTPDTA CGGQRNQTPG AVMGAQPYST
301: PNSSNNYLHG GRPSNNWQQQ GVDPGQTSSG TARMLGGGGG GGRNRNRGGG GGGRNRNRGG GGGGGRNRNH GGSGGFGSNW NGSGRSEQSI QHEGQQRQRT
401: GGGMQRNHQD EGQRQMRSMG RQQQGQRGRR MEWRPVQHNR APKDDPAA
001: MGKWNHRSRH HRRRSPERWY SGRQSSSSSD DGIPVWEKRF CEVIGSVPWQ KVVEAKDFKS WYNGNVITWD DSACEDTFHN EKKRFWSQVN GLHCDVSIPD
101: PDLYISEVDW DTFVDPELIR DLEKAYFAPP DDVNIGFKRG RGDKNWSGCD TVPEARMLET PWKNSDDIIE TGKKSSGWNL TEGSSWEAKP CCVNEKANDT
201: ASGGCLTTEE WRENQWIAKD RVNDSWEYSG QGKDDGWDKS GHQNKKVKGS EEYKKIDNPW EAQPSCIKET AKDTTWGGCS GEGWEDRGWN NDSWGSGGWD
301: NRDLGNQGME MKEWRGKGYS RDFREPKGCN PWKGGFVPDN VAFRESGVNA GGWQTCRGSE TKQINWDVKR ASDGWGRQND NAALREYGAN AGDWQRRRGC
401: EGNQRNWDAK RTGDGWGRQN KERVDSYGYH SNYKNSWPRR DDYQNRKVNF STK
101: PDLYISEVDW DTFVDPELIR DLEKAYFAPP DDVNIGFKRG RGDKNWSGCD TVPEARMLET PWKNSDDIIE TGKKSSGWNL TEGSSWEAKP CCVNEKANDT
201: ASGGCLTTEE WRENQWIAKD RVNDSWEYSG QGKDDGWDKS GHQNKKVKGS EEYKKIDNPW EAQPSCIKET AKDTTWGGCS GEGWEDRGWN NDSWGSGGWD
301: NRDLGNQGME MKEWRGKGYS RDFREPKGCN PWKGGFVPDN VAFRESGVNA GGWQTCRGSE TKQINWDVKR ASDGWGRQND NAALREYGAN AGDWQRRRGC
401: EGNQRNWDAK RTGDGWGRQN KERVDSYGYH SNYKNSWPRR DDYQNRKVNF STK
Arabidopsis Description
Oxidoreductase/transition metal ion-binding protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSU7]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.