Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d023249_P001 | Maize | mitochondrion, nucleus | 60.63 | 59.69 |
| OQU82840 | Sorghum | nucleus | 42.86 | 47.87 |
| Os11t0140900-01 | Rice | nucleus | 40.63 | 46.72 |
| TraesCS5A01G135600.1 | Wheat | nucleus | 39.37 | 41.47 |
| TraesCS5D01G142200.1 | Wheat | nucleus | 39.05 | 41.14 |
| HORVU5Hr1G043530.1 | Barley | nucleus | 38.1 | 40.0 |
| TraesCS5B01G134500.1 | Wheat | nucleus | 37.14 | 38.74 |
| Os12t0137400-00 | Rice | endoplasmic reticulum, nucleus | 37.14 | 38.11 |
| CDY41412 | Canola | nucleus | 19.05 | 22.9 |
| KXG22823 | Sorghum | nucleus | 32.38 | 22.77 |
| EES03760 | Sorghum | nucleus | 23.81 | 22.06 |
| CDX70268 | Canola | plastid | 20.32 | 20.98 |
| AT5G03990.1 | Thale cress | nucleus, plastid | 20.0 | 20.86 |
| VIT_08s0007g05940.t01 | Wine grape | nucleus | 26.03 | 20.65 |
| KXG22824 | Sorghum | nucleus | 17.78 | 20.0 |
| Bra009495.1-P | Field mustard | plastid | 20.63 | 19.52 |
| Solyc01g068170.2.1 | Tomato | nucleus | 25.4 | 18.96 |
| KRH29960 | Soybean | nucleus | 18.73 | 16.25 |
| KRH62921 | Soybean | nucleus | 17.78 | 15.77 |
| PGSC0003DMT400017586 | Potato | nucleus | 24.76 | 12.6 |
Protein Annotations
| EnsemblPlants:KXG22825 | EnsemblPlantsGene:SORBI_3008G013200 | PANTHER:PTHR34567 | PANTHER:PTHR34567:SF1 | ProteinID:KXG22825 | ProteinID:KXG22825.1 |
| SEG:seg | UniParc:UPI00081ABF05 | UniProt:A0A1B6PBJ9 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr8:-:1113534..1116922
Molecular Weight (calculated)
35994.6 Da
IEP (calculated)
6.513
GRAVY (calculated)
-1.270
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGWNRKRYV TGHRDRSAGA SRPPLPPPDY GDSHYPVPLW EREFCRHVGN ITWESFCENK QYVEPFDRLE PWDDSEAFDC FQNAKARFWA NYHGKPSDTP
101: LLDDPDLYID KVDYECKVDP ELVAELDSVG LPFEDDKSAP ATGWPNAGAD NKCTQNGSGN WDVFIEKPAE VNKWKSEVNL APDTVWGGQA KVITPEAVWG
201: GQSSNKWGNN SNTSWGASLE KPSWRDCSKN HYSSNNWNNF HSGPSNDRYR QPEDPSYTSG SGRKRNGSGG GYFKQRNNKQ SYQDEGQHQQ HRTGGWQQDQ
301: RGRNRQWRPV YNRAP
101: LLDDPDLYID KVDYECKVDP ELVAELDSVG LPFEDDKSAP ATGWPNAGAD NKCTQNGSGN WDVFIEKPAE VNKWKSEVNL APDTVWGGQA KVITPEAVWG
201: GQSSNKWGNN SNTSWGASLE KPSWRDCSKN HYSSNNWNNF HSGPSNDRYR QPEDPSYTSG SGRKRNGSGG GYFKQRNNKQ SYQDEGQHQQ HRTGGWQQDQ
301: RGRNRQWRPV YNRAP
001: MSNWRRQKPR NNNSNNYSRQ RGTTMTQSSS KPPLANCKIS VPAWEKDFCA VIGSVPWWKV VEAKRFMHIY DRVVQWDDSA GEDAFKNAKS RFWAEINGLT
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
Arabidopsis Description
FK506-binding-like protein [Source:UniProtKB/TrEMBL;Acc:Q93XY4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.