Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG22823 | Sorghum | nucleus | 40.0 | 25.0 |
| Zm00001d016089_P001 | Maize | extracellular, plasma membrane, vacuole | 25.36 | 23.91 |
| Zm00001d044634_P002 | Maize | nucleus | 31.43 | 21.57 |
| OQU82840 | Sorghum | nucleus | 21.43 | 21.28 |
| KXG22825 | Sorghum | mitochondrion, nucleus | 20.0 | 17.78 |
| EES03760 | Sorghum | nucleus | 19.29 | 15.88 |
| VIT_08s0007g05940.t01 | Wine grape | nucleus | 19.64 | 13.85 |
| CDX70268 | Canola | plastid | 15.0 | 13.77 |
| CDY41412 | Canola | nucleus | 12.86 | 13.74 |
| Bra009495.1-P | Field mustard | plastid | 15.36 | 12.91 |
| Solyc01g068170.2.1 | Tomato | nucleus | 19.29 | 12.8 |
| AT5G03990.1 | Thale cress | nucleus, plastid | 13.57 | 12.58 |
| KRH29960 | Soybean | nucleus | 15.36 | 11.85 |
| KRH62921 | Soybean | nucleus | 13.21 | 10.42 |
| PGSC0003DMT400017586 | Potato | nucleus | 19.64 | 8.89 |
Protein Annotations
| EnsemblPlants:KXG22824 | EnsemblPlantsGene:SORBI_3008G013100 | PANTHER:PTHR34567 | ProteinID:KXG22824 | ProteinID:KXG22824.1 | ProteinID:OQU78627.1 |
| SEG:seg | UniParc:UPI00081ACFD8 | UniProt:A0A1B6PAP7 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr8:-:1107626..1110505
Molecular Weight (calculated)
30221.0 Da
IEP (calculated)
8.508
GRAVY (calculated)
-1.242
Length
280 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAWNRSSDV NGDREDSGST SHPPLALPRP DDNGDNNVHP VPLWEREFCR NAYDIPWETF CENKRFIGLY RNVMDWDDSG ALENFEEAKE RFRAQYFGEV
101: GPNNGNNNFH GGGSSSNLHQ QVVDPGHTSS GTGRMLTGGG TMWMSGAFTG GATKWNGGGG SGNGTGRNWN VGSGNGTGRN WNVGSGGGGD NGNGNGSGRN
201: RNGGGGGSGS SSNWNCFGRG NYRSQREGQH QQRNGGGIHR NQDDLQHRMR SGGRQQQGQG RMKEWRPVQH NRAPKDDPAA
101: GPNNGNNNFH GGGSSSNLHQ QVVDPGHTSS GTGRMLTGGG TMWMSGAFTG GATKWNGGGG SGNGTGRNWN VGSGNGTGRN WNVGSGGGGD NGNGNGSGRN
201: RNGGGGGSGS SSNWNCFGRG NYRSQREGQH QQRNGGGIHR NQDDLQHRMR SGGRQQQGQG RMKEWRPVQH NRAPKDDPAA
001: MSNWRRQKPR NNNSNNYSRQ RGTTMTQSSS KPPLANCKIS VPAWEKDFCA VIGSVPWWKV VEAKRFMHIY DRVVQWDDSA GEDAFKNAKS RFWAEINGLT
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
Arabidopsis Description
FK506-binding-like protein [Source:UniProtKB/TrEMBL;Acc:Q93XY4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.