Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- extracellular 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d043187_P001 | Maize | nucleus | 82.94 | 82.7 |
| Zm00001d012569_P001 | Maize | nucleus | 81.18 | 81.9 |
| Os01t0801200-01 | Rice | nucleus | 60.29 | 60.12 |
| TraesCS3B01G360400.1 | Wheat | nucleus | 61.47 | 59.38 |
| TraesCS3A01G330400.1 | Wheat | nucleus | 60.59 | 58.69 |
| TraesCS3D01G323800.1 | Wheat | nucleus | 60.59 | 58.36 |
| Zm00001d010383_P001 | Maize | cytosol | 54.71 | 52.1 |
| OQU82840 | Sorghum | nucleus | 24.71 | 29.79 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.71 | 28.45 |
| CDY41412 | Canola | nucleus | 21.47 | 27.86 |
| CDX70268 | Canola | plastid | 21.47 | 23.93 |
| KXG22825 | Sorghum | mitochondrion, nucleus | 22.06 | 23.81 |
| AT5G03990.1 | Thale cress | nucleus, plastid | 19.71 | 22.19 |
| Bra009495.1-P | Field mustard | plastid | 21.47 | 21.92 |
| VIT_08s0007g05940.t01 | Wine grape | nucleus | 23.82 | 20.4 |
| KXG22824 | Sorghum | nucleus | 15.88 | 19.29 |
| KXG22823 | Sorghum | nucleus | 23.24 | 17.63 |
| Solyc01g068170.2.1 | Tomato | nucleus | 21.47 | 17.3 |
| KRH62921 | Soybean | nucleus | 16.47 | 15.77 |
| KRH29960 | Soybean | nucleus | 16.18 | 15.15 |
| PGSC0003DMT400017586 | Potato | nucleus | 21.47 | 11.79 |
Protein Annotations
| EnsemblPlants:EES03760 | EnsemblPlantsGene:SORBI_3003G326600 | EntrezGene:8055256 | PANTHER:PTHR34567 | PANTHER:PTHR34567:SF3 | ProteinID:EES03760 |
| ProteinID:EES03760.1 | RefSeq:XP_002458640.1 | SEG:seg | UniParc:UPI0001A85721 | UniProt:C5XMH2 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr3:-:65249337..65252479
Molecular Weight (calculated)
39289.1 Da
IEP (calculated)
6.437
GRAVY (calculated)
-1.079
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MAERRPIYRE PRRPPRSQGS GNFSVPLWEK KFCTDACAIP WAKLCETKRL MSLYKSVVDW DDSAALEAFN DAKARFCAVY HGQHYDIPLP DPNMFIDIVN
101: PDEYVDPELV ADLEKSRRRV PRKDNGVPDV WDSFIFSDKP VPVTGWGDTE TSFTHGQQLS VNWDNQLKHS VESNHKQMSG NWDYSVKQPA QTIGQQNSGN
201: WEVYEEQQDQ TSSRGEQTNP CITSWIMRDG SQDAWKHDYG WGPAAIQTDP WDNHQGSYEV PDSQGVSYGH WTHWRGRNND LGRRNTRNRG GPISSKPMKS
301: KYQTDEHNGA NNGWRNCRVR NDMHYYSYEQ ADYTKQSLAM
101: PDEYVDPELV ADLEKSRRRV PRKDNGVPDV WDSFIFSDKP VPVTGWGDTE TSFTHGQQLS VNWDNQLKHS VESNHKQMSG NWDYSVKQPA QTIGQQNSGN
201: WEVYEEQQDQ TSSRGEQTNP CITSWIMRDG SQDAWKHDYG WGPAAIQTDP WDNHQGSYEV PDSQGVSYGH WTHWRGRNND LGRRNTRNRG GPISSKPMKS
301: KYQTDEHNGA NNGWRNCRVR NDMHYYSYEQ ADYTKQSLAM
001: MSNWRRQKPR NNNSNNYSRQ RGTTMTQSSS KPPLANCKIS VPAWEKDFCA VIGSVPWWKV VEAKRFMHIY DRVVQWDDSA GEDAFKNAKS RFWAEINGLT
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
Arabidopsis Description
FK506-binding-like protein [Source:UniProtKB/TrEMBL;Acc:Q93XY4]
SUBAcon: [nucleus,plastid]
SUBAcon: [nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.