Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0801200-01 | Rice | nucleus | 32.68 | 34.02 |
| TraesCS3D01G323800.1 | Wheat | nucleus | 32.68 | 32.86 |
| TraesCS3A01G330400.1 | Wheat | nucleus | 32.39 | 32.76 |
| CDY41412 | Canola | nucleus | 23.94 | 32.44 |
| TraesCS3B01G360400.1 | Wheat | nucleus | 32.11 | 32.39 |
| EES03760 | Sorghum | nucleus | 28.45 | 29.71 |
| Zm00001d012569_P001 | Maize | nucleus | 27.32 | 28.78 |
| Zm00001d043187_P001 | Maize | nucleus | 27.32 | 28.45 |
| AT5G03990.1 | Thale cress | nucleus, plastid | 22.82 | 26.82 |
| CDX70268 | Canola | plastid | 22.82 | 26.56 |
| Zm00001d010383_P001 | Maize | cytosol | 25.35 | 25.21 |
| Bra009495.1-P | Field mustard | plastid | 22.82 | 24.32 |
| VIT_08s0007g05940.t01 | Wine grape | nucleus | 21.41 | 19.14 |
| Solyc01g068170.2.1 | Tomato | nucleus | 21.69 | 18.25 |
| KRH62921 | Soybean | nucleus | 16.9 | 16.9 |
| KRH29960 | Soybean | nucleus | 16.9 | 16.53 |
| PGSC0003DMT400017586 | Potato | nucleus | 23.94 | 13.73 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP00500_001 | EnsemblPlants:GSMUA_AchrUn_randomT00500_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG00500_001 | PANTHER:PTHR34567 | SEG:seg | UniParc:UPI000296301E |
| UniProt:M0U562 | MapMan:35.2 | : | : | : | : |
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG00500_001]
Coordinates
chrchrUn_random:-:2141612..2146691
Molecular Weight (calculated)
41315.9 Da
IEP (calculated)
6.833
GRAVY (calculated)
-1.087
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWRGRRRQQ QEEEGGWWGP TNRHSGKKYG RQPPSPAGLW CQTVPQWEKK FCTDVCLIPW RKLCETKRVM SMYENVVQWN DSAGEEAFKD AKARFWAEIN
101: GLPCDIPLPD PDMYIDVVNQ EAFVNPQLVE DLYKQPQTLD DGERDASCGW DSFIFAYRPV PASGWGDEDP VPTGWLGASC PAPTRCGHSE DPVLTNNITT
201: EPHSAMSYNN ALVGNLSYLA TKDTGVYKNF DSRNVHENPL NKDISENAWN PYELEKQFVH DKSWEDVRDT SRGNGRDTSW DRREHRNTES VGRFSRKRNV
301: GRFSLRHACP KDQVEDHQTN SWRNCRGRKR NEFRPHIHMK EEMLRKYRER SCTEG
101: GLPCDIPLPD PDMYIDVVNQ EAFVNPQLVE DLYKQPQTLD DGERDASCGW DSFIFAYRPV PASGWGDEDP VPTGWLGASC PAPTRCGHSE DPVLTNNITT
201: EPHSAMSYNN ALVGNLSYLA TKDTGVYKNF DSRNVHENPL NKDISENAWN PYELEKQFVH DKSWEDVRDT SRGNGRDTSW DRREHRNTES VGRFSRKRNV
301: GRFSLRHACP KDQVEDHQTN SWRNCRGRKR NEFRPHIHMK EEMLRKYRER SCTEG
001: MSNWRRQKPR NNNSNNYSRQ RGTTMTQSSS KPPLANCKIS VPAWEKDFCA VIGSVPWWKV VEAKRFMHIY DRVVQWDDSA GEDAFKNAKS RFWAEINGLT
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
Arabidopsis Description
FK506-binding-like protein [Source:UniProtKB/TrEMBL;Acc:Q93XY4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.