Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES03760 | Sorghum | nucleus | 81.9 | 81.18 |
| Zm00001d043187_P001 | Maize | nucleus | 77.15 | 76.25 |
| Os01t0801200-01 | Rice | nucleus | 54.3 | 53.67 |
| TraesCS3B01G360400.1 | Wheat | nucleus | 55.19 | 52.84 |
| TraesCS3D01G323800.1 | Wheat | nucleus | 54.9 | 52.41 |
| TraesCS3A01G330400.1 | Wheat | nucleus | 54.3 | 52.14 |
| Zm00001d010383_P001 | Maize | cytosol | 53.71 | 50.7 |
| CDY41412 | Canola | nucleus | 21.36 | 27.48 |
| GSMUA_AchrUn_... | Banana | nucleus | 28.78 | 27.32 |
| Zm00001d052461_P001 | Maize | nucleus | 22.85 | 27.21 |
| Zm00001d016089_P001 | Maize | extracellular, plasma membrane, vacuole | 22.26 | 25.25 |
| CDX70268 | Canola | plastid | 21.36 | 23.61 |
| Zm00001d023249_P001 | Maize | mitochondrion, nucleus | 21.96 | 23.12 |
| AT5G03990.1 | Thale cress | nucleus, plastid | 19.58 | 21.85 |
| Bra009495.1-P | Field mustard | plastid | 21.36 | 21.62 |
| Zm00001d044634_P002 | Maize | nucleus | 24.93 | 20.59 |
| Zm00001d044509_P001 | Maize | nucleus | 5.93 | 8.55 |
Protein Annotations
| EMBL:BT035156 | EnsemblPlants:Zm00001d012569_P001 | EnsemblPlants:Zm00001d012569_T001 | EnsemblPlantsGene:Zm00001d012569 | EntrezGene:100193010 | PANTHER:PTHR34567 |
| PANTHER:PTHR34567:SF3 | ProteinID:AQK99885.1 | UniParc:UPI00017B67BE | UniProt:B4FDG8 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr8:+:176786650..176789645
Molecular Weight (calculated)
38851.1 Da
IEP (calculated)
7.582
GRAVY (calculated)
-0.964
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MAERRPIYRE PGKPRRRPRS QGSVNLSVPM WEKKFCTDAC AVPWAKLCEA KRLMTLYKSV VDWDDSAALE AFNDAKARFC AVYHGQHYDI PLPDPDMFID
101: IINPDEYVDL ELVADLEKSR RRVPRKDDGV PDVWDSFILS DKPVPVTGWG DTDTSFTHGQ QLSVNWDYQL KHSVEANHKH MSANWDYSIK RPAQIVCQQN
201: SGKQQDQTSS QGEQTNSCIS HWIMRGGSQD AWKHDSGWGP AAIQTDLWDN RQGSYEVPDS TGMPYGHWTH CRRRNDDSGR RNTRNRGGPI SSKPMKSKYQ
301: TDEHNVAING WWNCRIRNDV YYYPHGQADY TKQSHAM
101: IINPDEYVDL ELVADLEKSR RRVPRKDDGV PDVWDSFILS DKPVPVTGWG DTDTSFTHGQ QLSVNWDYQL KHSVEANHKH MSANWDYSIK RPAQIVCQQN
201: SGKQQDQTSS QGEQTNSCIS HWIMRGGSQD AWKHDSGWGP AAIQTDLWDN RQGSYEVPDS TGMPYGHWTH CRRRNDDSGR RNTRNRGGPI SSKPMKSKYQ
301: TDEHNVAING WWNCRIRNDV YYYPHGQADY TKQSHAM
001: MSNWRRQKPR NNNSNNYSRQ RGTTMTQSSS KPPLANCKIS VPAWEKDFCA VIGSVPWWKV VEAKRFMHIY DRVVQWDDSA GEDAFKNAKS RFWAEINGLT
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
Arabidopsis Description
FK506-binding-like protein [Source:UniProtKB/TrEMBL;Acc:Q93XY4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.