Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41412 | Canola | nucleus | 41.39 | 47.71 |
| CDX70268 | Canola | plastid | 47.68 | 47.21 |
| Bra009495.1-P | Field mustard | plastid | 47.68 | 43.24 |
| Os11t0140900-01 | Rice | nucleus | 23.18 | 25.55 |
| OQU82840 | Sorghum | nucleus | 22.85 | 24.47 |
| TraesCS5A01G135600.1 | Wheat | nucleus | 23.51 | 23.75 |
| TraesCS5D01G142200.1 | Wheat | nucleus | 22.85 | 23.08 |
| GSMUA_AchrUn_... | Banana | nucleus | 26.82 | 22.82 |
| HORVU5Hr1G043530.1 | Barley | nucleus | 22.19 | 22.33 |
| Zm00001d052461_P001 | Maize | nucleus | 20.86 | 22.26 |
| TraesCS5B01G134500.1 | Wheat | nucleus | 21.85 | 21.85 |
| Os12t0137400-00 | Rice | endoplasmic reticulum, nucleus | 21.52 | 21.17 |
| Os01t0801200-01 | Rice | nucleus | 23.84 | 21.11 |
| TraesCS3B01G360400.1 | Wheat | nucleus | 23.84 | 20.45 |
| Zm00001d016089_P001 | Maize | extracellular, plasma membrane, vacuole | 19.87 | 20.2 |
| KXG22825 | Sorghum | mitochondrion, nucleus | 20.86 | 20.0 |
| Zm00001d023249_P001 | Maize | mitochondrion, nucleus | 21.19 | 20.0 |
| TraesCS3A01G330400.1 | Wheat | nucleus | 23.18 | 19.94 |
| Zm00001d043187_P001 | Maize | nucleus | 22.52 | 19.94 |
| TraesCS3D01G323800.1 | Wheat | nucleus | 23.18 | 19.83 |
| EES03760 | Sorghum | nucleus | 22.19 | 19.71 |
| Zm00001d012569_P001 | Maize | nucleus | 21.85 | 19.58 |
| Zm00001d044634_P002 | Maize | nucleus | 23.84 | 17.65 |
| Zm00001d010383_P001 | Maize | cytosol | 20.2 | 17.09 |
| AT3G51940.2 | Thale cress | mitochondrion, nucleus | 25.17 | 16.63 |
| KXG22823 | Sorghum | nucleus | 20.86 | 14.06 |
| KXG22824 | Sorghum | nucleus | 12.58 | 13.57 |
Protein Annotations
| ArrayExpress:AT5G03990 | EMBL:AY054579 | EMBL:AY064676 | EnsemblPlants:AT5G03990.1 | EnsemblPlantsGene:AT5G03990 | EntrezGene:830278 |
| GO:GO:0005575 | GO:GO:0008150 | PANTHER:PTHR34567 | PANTHER:PTHR34567:SF2 | PO:PO:0000293 | ProteinID:AED90680.1 |
| RefSeq:AT5G03990 | RefSeq:AT5G03990-TAIR-G | RefSeq:NP_568132.1 | SEG:seg | TAIR:AT5G03990 | TAIR:AT5G03990.1 |
| Unigene:At.26461 | UniParc:UPI00000A065A | UniProt:Q93XY4 | MapMan:35.2 | : | : |
Description
FK506-binding-like protein [Source:UniProtKB/TrEMBL;Acc:Q93XY4]
Coordinates
chr5:+:1075671..1077549
Molecular Weight (calculated)
34879.5 Da
IEP (calculated)
4.948
GRAVY (calculated)
-1.218
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNWRRQKPR NNNSNNYSRQ RGTTMTQSSS KPPLANCKIS VPAWEKDFCA VIGSVPWWKV VEAKRFMHIY DRVVQWDDSA GEDAFKNAKS RFWAEINGLT
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.