Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d044634_P002 | Maize | nucleus | 59.6 | 43.38 |
| KXG22823 | Sorghum | nucleus | 42.09 | 27.9 |
| Zm00001d052461_P001 | Maize | nucleus | 26.26 | 27.56 |
| Zm00001d023249_P001 | Maize | mitochondrion, nucleus | 28.62 | 26.56 |
| KXG22824 | Sorghum | nucleus | 23.91 | 25.36 |
| Zm00001d043187_P001 | Maize | nucleus | 25.59 | 22.29 |
| Zm00001d012569_P001 | Maize | nucleus | 25.25 | 22.26 |
| CDY41412 | Canola | nucleus | 18.52 | 20.99 |
| AT5G03990.1 | Thale cress | nucleus, plastid | 20.2 | 19.87 |
| Zm00001d010383_P001 | Maize | cytosol | 22.22 | 18.49 |
| CDX70268 | Canola | plastid | 18.52 | 18.03 |
| Bra009495.1-P | Field mustard | plastid | 18.52 | 16.52 |
| Zm00001d044509_P001 | Maize | nucleus | 5.72 | 7.26 |
Protein Annotations
| EnsemblPlants:Zm00001d016089_P001 | EnsemblPlants:Zm00001d016089_T001 | EnsemblPlantsGene:Zm00001d016089 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR34567 | PANTHER:PTHR34567:SF1 | ProteinID:AQK70050.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0008424EA0 |
| UniProt:A0A1D6H5F3 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr5:+:144125081..144126359
Molecular Weight (calculated)
33063.9 Da
IEP (calculated)
4.288
GRAVY (calculated)
-0.408
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MLVPRILIPI FPICAGDNYC PVPLWERKFC CNAYDIPWKR FCKKKQTIEL YKNVMDWDDS GALENFEAAK ERFGAKYHGE PFEDPLLDPD MYIDEVDHLC
101: EVDPELVADL DKVPDVDKVV ELQLVANLGC GEPVADLVPM GHGELGAIPT PTGWGEQDAN LTPTGWGEQD ANLAPIGWGE PVANVAPMGW GEPISLTPGT
201: AWEGQTNQTQ HSNKWSNNNF GWNSPLDQPQ CTLSNWNDNS HGDRSSNNWY QQEVDLGHMP FGTRRNLNGN SRRWIWAACL LGLGGSRMVM VVAAAIV
101: EVDPELVADL DKVPDVDKVV ELQLVANLGC GEPVADLVPM GHGELGAIPT PTGWGEQDAN LTPTGWGEQD ANLAPIGWGE PVANVAPMGW GEPISLTPGT
201: AWEGQTNQTQ HSNKWSNNNF GWNSPLDQPQ CTLSNWNDNS HGDRSSNNWY QQEVDLGHMP FGTRRNLNGN SRRWIWAACL LGLGGSRMVM VVAAAIV
001: MSNWRRQKPR NNNSNNYSRQ RGTTMTQSSS KPPLANCKIS VPAWEKDFCA VIGSVPWWKV VEAKRFMHIY DRVVQWDDSA GEDAFKNAKS RFWAEINGLT
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
101: CDLSLPDPDV YIDDVDWDAE VDNELILDLE RGPDPLTEEQ EHVVILDALV LSGQYGGLGW GTGWGDAEGI NEENVGKGKP ENSWGDQKYD GWNEDSWGIK
201: EKTETWDHNN NNTNTDSWDH NNNFKAETWD QKNCNNNSFN YKKVENWNGR DQGRENRGWR KRGEGRHGGE RVEDCRWRNG RGRSRGGFQQ HSANAWGWTE
301: SF
Arabidopsis Description
FK506-binding-like protein [Source:UniProtKB/TrEMBL;Acc:Q93XY4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.