Skip to main content
crop-pal logo
Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • mitochondrion 3
  • cytosol 1
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d010383_P001 Maize cytosol 41.03 26.89
Zm00001d052461_P001 Maize nucleus 7.69 6.36
VIT_08s0007g05940.t01 Wine grape nucleus 10.68 6.3
Zm00001d043187_P001 Maize nucleus 8.97 6.16
Zm00001d023249_P001 Maize mitochondrion, nucleus 8.12 5.94
Zm00001d012569_P001 Maize nucleus 8.55 5.93
KRH29960 Soybean nucleus 8.97 5.79
Zm00001d016089_P001 Maize extracellular, plasma membrane, vacuole 7.26 5.72
KRH62921 Soybean nucleus 8.55 5.63
Zm00001d044634_P002 Maize nucleus 9.4 5.39
CDX73674 Canola mitochondrion, nucleus 8.97 5.04
CDX78048 Canola mitochondrion, nucleus 8.97 4.99
Solyc01g068170.2.1 Tomato nucleus 8.97 4.98
PGSC0003DMT400017586 Potato nucleus 10.68 4.04
Bra006884.1-P Field mustard plastid 9.4 3.61
AT3G51940.2 Thale cress mitochondrion, nucleus 6.41 3.28
Protein Annotations
EnsemblPlants:Zm00001d044509_P001EnsemblPlants:Zm00001d044509_T001EnsemblPlantsGene:Zm00001d044509ProteinID:ONM41440.1UniParc:UPI0008443320UniProt:A0A1D6NMP4
MapMan:35.2:::::
Description
No Description!
Coordinates
chr3:+:230343694..230344807
Molecular Weight (calculated)
26625.9 Da
IEP (calculated)
9.337
GRAVY (calculated)
-0.901
Length
234 amino acids
Sequence
(BLAST)
001: MTANWDYSVK RPAQTVWSAK LRETAGSNQQ PGEQTNSCIS LSIMRDGSQD AWKHDYGWDP TAIQTDLWDN HQGSYEVPDG QGVPYGHWTH WRRRNNDSGR
101: RNTRNSGGPI SSKPMKSKDQ TDEHNVAING WRNCRVRNVL SANHHQQKNL QPAWSRMNNI VTDYLCHSNN KSKGHDNEDQ GSIAGLNIPR SQILSYGFLQ
201: SFLLLHVTFL KHNYMGFTIQ PFGSTADGVK LLLY
Best Arabidopsis Sequence Match ( AT1G34220.2 )
(BLAST)
001: MSMLDSFFNK GFKAAKCKTL LKLTIPRIKL IRNRREAQIK QMRREIAKLL ETGQEATARI RVEHIIREEK MMAAQEILEL FCELIAVRLP IIEAQRECPL
101: DLKEAISSVC FAAPRCSDLT ELQQVQILFV SKYGKEFVAA ASELKPDSGV NRKLVELLSV RAPSPETKLK LLKEIAEEHE LDWDPASTET DLFKSHEDLL
201: DGPKQFGGGS KLPLPEEQNE KTNLTSLSAA KEKSDSDSEY DILDFPEVPN VLLRPTPGAT SVNAPDAAKS ASYEHTSHDL PFDSENAGVE KTASKRDEHP
301: AKASKTVVEG QQSSPILMES FEKKNYSPPS IDAVGPIPTK ESGASRDTPR KISDGDLQDV LMAAQAAADS AERAASAARS AASLAQLRIN ELTRKTSDQY
401: PESPSENPFH APSMGNLQFD HQNSSASSSG DLTELQRAET SSLFNSEQNN QQPQTHSSME KPQFDRQNSS FSSYGDLTPQ RFHSMEKPQF DHQNSSGSNY
501: DDLTPQRFSS LEKPQFDHQN SSGSNYDDLT PHRFPSMEKP QFDHQNSSVS SYGDLPELQR PETSPLDRLS PDQDHQQMRL PSMEDDPYYS YPNLFTSQKH
601: DPSSGSHSFS DNTRPAHDS
Arabidopsis Description
Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:F4HUX0]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.