Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 1
- nucleus 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d010383_P001 | Maize | cytosol | 41.03 | 26.89 |
Zm00001d052461_P001 | Maize | nucleus | 7.69 | 6.36 |
VIT_08s0007g05940.t01 | Wine grape | nucleus | 10.68 | 6.3 |
Zm00001d043187_P001 | Maize | nucleus | 8.97 | 6.16 |
Zm00001d023249_P001 | Maize | mitochondrion, nucleus | 8.12 | 5.94 |
Zm00001d012569_P001 | Maize | nucleus | 8.55 | 5.93 |
KRH29960 | Soybean | nucleus | 8.97 | 5.79 |
Zm00001d016089_P001 | Maize | extracellular, plasma membrane, vacuole | 7.26 | 5.72 |
KRH62921 | Soybean | nucleus | 8.55 | 5.63 |
Zm00001d044634_P002 | Maize | nucleus | 9.4 | 5.39 |
CDX73674 | Canola | mitochondrion, nucleus | 8.97 | 5.04 |
CDX78048 | Canola | mitochondrion, nucleus | 8.97 | 4.99 |
Solyc01g068170.2.1 | Tomato | nucleus | 8.97 | 4.98 |
PGSC0003DMT400017586 | Potato | nucleus | 10.68 | 4.04 |
Bra006884.1-P | Field mustard | plastid | 9.4 | 3.61 |
AT3G51940.2 | Thale cress | mitochondrion, nucleus | 6.41 | 3.28 |
Protein Annotations
EnsemblPlants:Zm00001d044509_P001 | EnsemblPlants:Zm00001d044509_T001 | EnsemblPlantsGene:Zm00001d044509 | ProteinID:ONM41440.1 | UniParc:UPI0008443320 | UniProt:A0A1D6NMP4 |
MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3:+:230343694..230344807
Molecular Weight (calculated)
26625.9 Da
IEP (calculated)
9.337
GRAVY (calculated)
-0.901
Length
234 amino acids
Sequence
(BLAST)
(BLAST)
001: MTANWDYSVK RPAQTVWSAK LRETAGSNQQ PGEQTNSCIS LSIMRDGSQD AWKHDYGWDP TAIQTDLWDN HQGSYEVPDG QGVPYGHWTH WRRRNNDSGR
101: RNTRNSGGPI SSKPMKSKDQ TDEHNVAING WRNCRVRNVL SANHHQQKNL QPAWSRMNNI VTDYLCHSNN KSKGHDNEDQ GSIAGLNIPR SQILSYGFLQ
201: SFLLLHVTFL KHNYMGFTIQ PFGSTADGVK LLLY
101: RNTRNSGGPI SSKPMKSKDQ TDEHNVAING WRNCRVRNVL SANHHQQKNL QPAWSRMNNI VTDYLCHSNN KSKGHDNEDQ GSIAGLNIPR SQILSYGFLQ
201: SFLLLHVTFL KHNYMGFTIQ PFGSTADGVK LLLY
001: MSMLDSFFNK GFKAAKCKTL LKLTIPRIKL IRNRREAQIK QMRREIAKLL ETGQEATARI RVEHIIREEK MMAAQEILEL FCELIAVRLP IIEAQRECPL
101: DLKEAISSVC FAAPRCSDLT ELQQVQILFV SKYGKEFVAA ASELKPDSGV NRKLVELLSV RAPSPETKLK LLKEIAEEHE LDWDPASTET DLFKSHEDLL
201: DGPKQFGGGS KLPLPEEQNE KTNLTSLSAA KEKSDSDSEY DILDFPEVPN VLLRPTPGAT SVNAPDAAKS ASYEHTSHDL PFDSENAGVE KTASKRDEHP
301: AKASKTVVEG QQSSPILMES FEKKNYSPPS IDAVGPIPTK ESGASRDTPR KISDGDLQDV LMAAQAAADS AERAASAARS AASLAQLRIN ELTRKTSDQY
401: PESPSENPFH APSMGNLQFD HQNSSASSSG DLTELQRAET SSLFNSEQNN QQPQTHSSME KPQFDRQNSS FSSYGDLTPQ RFHSMEKPQF DHQNSSGSNY
501: DDLTPQRFSS LEKPQFDHQN SSGSNYDDLT PHRFPSMEKP QFDHQNSSVS SYGDLPELQR PETSPLDRLS PDQDHQQMRL PSMEDDPYYS YPNLFTSQKH
601: DPSSGSHSFS DNTRPAHDS
101: DLKEAISSVC FAAPRCSDLT ELQQVQILFV SKYGKEFVAA ASELKPDSGV NRKLVELLSV RAPSPETKLK LLKEIAEEHE LDWDPASTET DLFKSHEDLL
201: DGPKQFGGGS KLPLPEEQNE KTNLTSLSAA KEKSDSDSEY DILDFPEVPN VLLRPTPGAT SVNAPDAAKS ASYEHTSHDL PFDSENAGVE KTASKRDEHP
301: AKASKTVVEG QQSSPILMES FEKKNYSPPS IDAVGPIPTK ESGASRDTPR KISDGDLQDV LMAAQAAADS AERAASAARS AASLAQLRIN ELTRKTSDQY
401: PESPSENPFH APSMGNLQFD HQNSSASSSG DLTELQRAET SSLFNSEQNN QQPQTHSSME KPQFDRQNSS FSSYGDLTPQ RFHSMEKPQF DHQNSSGSNY
501: DDLTPQRFSS LEKPQFDHQN SSGSNYDDLT PHRFPSMEKP QFDHQNSSVS SYGDLPELQR PETSPLDRLS PDQDHQQMRL PSMEDDPYYS YPNLFTSQKH
601: DPSSGSHSFS DNTRPAHDS
Arabidopsis Description
Regulator of Vps4 activity in the MVB pathway protein [Source:UniProtKB/TrEMBL;Acc:F4HUX0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.